iskana / PBWT-secLinks
☆14Updated 5 years ago
Alternatives and similar repositories for PBWT-sec
Users that are interested in PBWT-sec are comparing it to the libraries listed below
Sorting:
- TU DOrtmund lossless COMPression framework☆19Updated last year
- implementation of dynamic wavelet matrix(tree) and static wavelet matrix☆23Updated 6 years ago
- An implementation of optimized parallel radix sort☆50Updated 7 years ago
- A cheatsheet for most common Stringology tasks☆14Updated 4 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆66Updated 2 years ago
- ☆20Updated 5 years ago
- Fast approximation of similarity for sets of very different sizes☆20Updated 3 years ago
- BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented…☆12Updated 12 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 3 years ago
- An implementation of SEPARO, a board game, with Monte Carlo Tree Search algorithm in Rust/wasm.☆20Updated 5 years ago
- Dockerfile for Literate Computing(for Reproducible Infrastructure)☆22Updated last month
- Compact Tree Representation☆16Updated 8 years ago
- GTS: Genome Transformation Subprograms☆15Updated 2 years ago
- compressed, queryable variation graphs☆11Updated 10 years ago
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆14Updated 7 years ago
- vector illustrations of BWT based searching on small strings☆16Updated 6 years ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- Dynamic succinct/compressed data structures☆112Updated 3 weeks ago
- Extremely fast inplace radix sort☆43Updated 5 years ago
- String Visualizer☆12Updated 3 weeks ago
- Compact Data Structures Library☆101Updated 3 years ago
- About Workflow related meetup☆14Updated last year
- Implementation of eBWT using Prefix-free parse (PFP)☆14Updated 5 months ago
- Header-only, gzread-like reader for gzip, bz2, and xz.☆11Updated 7 years ago
- http://a-terada.github.com/lamp/☆14Updated 2 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11Updated 8 years ago
- FM-index representation of a de Bruijn graph☆27Updated 8 years ago
- Static Huffman coding☆10Updated 8 years ago
- Describe stencil formurae without even translating them☆58Updated 8 years ago
- Imperative command-line argument parser library for Rust with no dependencies, no macros, and no implicit I/O☆27Updated 4 months ago