☆14Feb 7, 2020Updated 6 years ago
Alternatives and similar repositories for PBWT-sec
Users that are interested in PBWT-sec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11May 2, 2017Updated 8 years ago
- BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented…☆12May 9, 2013Updated 12 years ago
- collection of data structures and algorithms☆19Mar 19, 2019Updated 7 years ago
- Code for paper: Localized matrix factorization for recommendation based on matrix block diagonal forms☆10Jan 27, 2015Updated 11 years ago
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 10 years ago
- ☆30Sep 11, 2023Updated 2 years ago
- Estimation of per-individual inbreeding coefficients under a probabilistic framework☆22Aug 8, 2023Updated 2 years ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Apr 25, 2022Updated 3 years ago
- ☆27Sep 12, 2016Updated 9 years ago
- Seekable sources and efficient incremental sinks☆17Sep 20, 2017Updated 8 years ago
- lightning☆11Oct 20, 2015Updated 10 years ago
- PRINCESS source code☆11Oct 15, 2016Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Compact Tree Representation☆16Mar 16, 2017Updated 9 years ago
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 8 years ago
- Finding all the circuits of a directed graph with self-arcs and multiple-arcs by K.A. Hawick and H.A. James☆19Apr 11, 2013Updated 12 years ago
- GenNotes – public consensus annotation of genetic variants☆11Mar 27, 2016Updated 9 years ago
- Stable sort algorithms and their stability proofs in Rocq☆25Dec 10, 2025Updated 3 months ago
- C++ wrapper to tabix indexer☆17Jun 27, 2025Updated 8 months ago
- Protocols for Secure Genomic Computation☆12Aug 28, 2017Updated 8 years ago
- ☆14Jan 20, 2016Updated 10 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Simple and fast MinHash implementation in C with Python wrapper☆13Jul 24, 2025Updated 8 months ago
- succinct labeled graphs with collections and paths☆15Nov 18, 2018Updated 7 years ago
- Efficient construction of the BWT using string compression☆21Mar 17, 2026Updated last week
- try dat using docker☆30Mar 14, 2018Updated 8 years ago
- MAW: a suite on the computation and application of Minimal Absent Words☆16Nov 1, 2021Updated 4 years ago
- Relative data structures based on the BWT☆12Apr 28, 2018Updated 7 years ago
- A library for compressing, encrypting, and querying alignment data.☆15Jul 6, 2016Updated 9 years ago
- tty recorder☆28Nov 18, 2016Updated 9 years ago
- Space efficient (graph) algorithms☆18Sep 10, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A git tool to restore the commit logs☆12Mar 1, 2026Updated 3 weeks ago
- XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.☆13Jan 19, 2023Updated 3 years ago
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 3 years ago
- Userland NAT64 implementation on Linux in Ruby☆11Sep 25, 2025Updated 6 months ago
- Streaming loader for Amazon Redshift Spectrum☆10May 21, 2025Updated 10 months ago
- Provisions: Privacy-preserving proofs of solvency for Bitcoin☆14Jan 10, 2016Updated 10 years ago
- C++ library for analysing and storing large-scale cohorts of sequence variant data☆17Aug 27, 2019Updated 6 years ago