eulerlab / QDSpyLinks
QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.
☆11Updated 3 weeks ago
Alternatives and similar repositories for QDSpy
Users that are interested in QDSpy are comparing it to the libraries listed below
Sorting:
- pipeline for volumetric cell segmentation☆13Updated 2 weeks ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆152Updated 3 years ago
- Pre-processing pipeline for widefield data☆11Updated 4 years ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Updated 2 weeks ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 9 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Serial-section automated anatomy extension for ScanImage☆15Updated last month
- Single photon tools for Neuroscience☆35Updated last year
- Registration of cells across sessions.☆75Updated last year
- a visualization method for neural data☆236Updated 5 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆175Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆131Updated 2 months ago
- Tools to process widefield data☆12Updated 4 years ago
- ☆52Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- pyqt5 dependent applications for IBL sessions☆29Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 5 months ago
- Control and design of two-photon photostimulation experiments☆17Updated last year
- Browser-based NWB visualization and DANDI exploration☆59Updated last week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆95Updated 10 months ago
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆43Updated last year
- Collection of tools to handle Neuropixel 1.0 and 2.0 data☆17Updated last month
- Code for internal lab sharing - polishing has started but is by no means complete☆129Updated last year
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago