amckenna41 / aaindexLinks
Python package for AAIndex database (https://www.genome.jp/aaindex/)
☆11Updated last year
Alternatives and similar repositories for aaindex
Users that are interested in aaindex are comparing it to the libraries listed below
Sorting:
- ☆17Updated 3 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆40Updated last year
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆35Updated 4 years ago
- Conversion of PDBx/mmCIF files to best effort/minimal PDB files☆18Updated 8 months ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆28Updated last year
- Clusters protein chains based on CA distance difference☆14Updated 5 months ago
- ☆30Updated 2 months ago
- Tools for annotation, processing and ML for antibody sequences☆31Updated this week
- Base image providing dependencies for ASKCOS Docker images☆12Updated last year
- ☆15Updated 2 years ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆37Updated 2 years ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆58Updated 8 months ago
- Ultra-fast in-silico structure mutation☆34Updated 3 months ago
- Protein Structure Archiver☆12Updated last year
- Python package to manage protein structures and their annotations☆43Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆46Updated 2 weeks ago
- ☆15Updated 4 months ago
- Humanness of de-novo designed proteins☆19Updated last month
- 2D portraits of 3D protein structures☆22Updated 2 months ago
- Non-sequential structural alignment program for protein structure☆19Updated 8 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆57Updated last month
- PDBClean helps create a curated ensemble of molecular structures☆12Updated 3 months ago
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated 7 months ago
- Rapid structure-based virtual screening for RNA targets.☆16Updated 2 months ago
- ML toolset for creating TED: The Encyclopedia of Domains☆21Updated last month
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆26Updated last year
- ☆36Updated 3 weeks ago
- ☆58Updated 8 months ago