LC-PLM: long-context protein language model based on BiMamba-S architecture
☆22Jan 2, 2025Updated last year
Alternatives and similar repositories for LC-PLM
Users that are interested in LC-PLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein function prediction using protein structures and deep graph neural networks.☆20Jan 24, 2025Updated last year
- DMFF-DTA: Dual Modality Feature Fused Neural Network Integrating Binding Site Information for Drug Target Affinity Prediction☆20Feb 18, 2025Updated last year
- ☆22Dec 15, 2024Updated last year
- code for SeqDance/ESMDance, biophysics-informed protein language models☆58Jan 28, 2026Updated 2 months ago
- The first large protein language model trained follows structure instructions.☆95May 20, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- T-ALPHA: a hierarchical transformer-based deep neural network for protein-ligand binding affinity prediction with uncertainty-aware self-…☆30Feb 24, 2025Updated last year
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- Base pair-augmented SE(3)-flow matching for conditional RNA 3D structure generation☆12Jan 19, 2026Updated 2 months ago
- ☆18Feb 5, 2025Updated last year
- Predict scalar coupling in molecules☆15Mar 14, 2021Updated 5 years ago
- ☆15Dec 18, 2021Updated 4 years ago
- ☆46Jul 13, 2025Updated 8 months ago
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆51Jun 30, 2025Updated 9 months ago
- Official implementation of Panacea: A foundation model for clinical trial design, recruitment, search, and summarization.☆18Dec 24, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Mar 22, 2023Updated 3 years ago
- ☆18Jun 22, 2024Updated last year
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆87May 16, 2025Updated 10 months ago
- A sample of implementing FHIR Works on AWS Integration Transform☆23Nov 2, 2020Updated 5 years ago
- ☆42Mar 26, 2025Updated last year
- ☆24Aug 26, 2024Updated last year
- ☆14Oct 23, 2024Updated last year
- ☆35Jun 29, 2024Updated last year
- Julia implementation of flash-attention operation for neural networks.☆11May 31, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆253Mar 5, 2026Updated last month
- Homomer symmetry prediction from protein sequence☆44Mar 13, 2025Updated last year
- ☆37Mar 30, 2025Updated last year
- spotify cli for the official client via dbus☆13May 5, 2020Updated 5 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆96Apr 24, 2024Updated last year
- Synthesis of molecules from fragments into larger molecules using graph-based representations and techniques.☆13Nov 25, 2015Updated 10 years ago
- Physico-chemical and biological property prediction for small molecules☆12May 3, 2022Updated 3 years ago
- [AAAI 2025] CoPRA: Bridging Cross-domain Pretrained Sequence Models with Complex Structures for Protein-RNA Binding Affinity Prediction☆36Dec 23, 2024Updated last year
- ☆15Mar 4, 2024Updated 2 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ProtMamba: a homology-aware but alignment-free protein state space model☆85Jun 3, 2025Updated 10 months ago
- Fragment binding prediction with ColabFold☆43Nov 9, 2025Updated 5 months ago
- ☆14Jan 18, 2024Updated 2 years ago
- ☆20Mar 31, 2025Updated last year
- [Neural Networks'24] Multi-task Heterogeneous Graph Learning on Electronic Health Records☆19Sep 22, 2024Updated last year
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆44Aug 5, 2025Updated 8 months ago
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆53Aug 2, 2025Updated 8 months ago