mirror of GNU Datamash. Send questions/comments/bugs to bug-datamash@gnu.org
☆78Jul 28, 2026Updated 2 weeks ago
Alternatives and similar repositories for datamash
Users that are interested in datamash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.☆12Jul 22, 2020Updated 6 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19May 13, 2016Updated 10 years ago
- A Teaching Engine for Genomics☆12Mar 21, 2021Updated 5 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- A command line interface tool to compute statistics from a file or the command line.☆39Feb 8, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A 'time'-like utility for Unix that measures peak memory usage☆18Jun 5, 2024Updated 2 years ago
- Chromatin segmentation in R☆19Feb 4, 2018Updated 8 years ago
- BGZF Stream☆13Jul 27, 2023Updated 3 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 2 months ago
- Toolkit for processing TAB-delimited format☆62Oct 10, 2024Updated last year
- Log command line events to a graph database :)☆13Mar 12, 2016Updated 10 years ago
- Half-baked idea: Conceptual building blocks for data analysis.☆12May 7, 2015Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scalable RNA-seq analysis☆73Jan 12, 2021Updated 5 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23May 19, 2025Updated last year
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆33Jul 27, 2026Updated 2 weeks ago
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Mar 3, 2017Updated 9 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 9 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Feb 20, 2015Updated 11 years ago
- Metagenomics-focused BAM file manipulation☆15Jul 8, 2019Updated 7 years ago
- Target prediction☆14May 8, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- Tools for handling HiC and 5C data☆24Feb 5, 2024Updated 2 years ago
- Tools for doing x way meta-analysis☆12Apr 12, 2022Updated 4 years ago
- R package to detect splicing QTLs (sQTLs)☆15Feb 28, 2021Updated 5 years ago
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- Build components for CloudMan, Galaxy on the Cloud, or Galaxy Server☆20Jun 27, 2017Updated 9 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆104Feb 27, 2023Updated 3 years ago
- Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.☆14Jun 22, 2015Updated 11 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Calculates the probability of a haplotype given a population reference panel☆12Dec 9, 2024Updated last year
- fast, pure-python interval overlap testing☆52Oct 2, 2020Updated 5 years ago
- A cross-platform, efficient and practical CSV/TSV toolkit in Golang☆1,166Jul 29, 2026Updated 2 weeks ago
- Quality control plotting for long reads☆10May 14, 2024Updated 2 years ago
- Build and Deliver Software with Containers☆34Jun 12, 2026Updated 2 months ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Sep 20, 2017Updated 8 years ago
- re-assembly and analysis of the Marine Microbial Eukaryotic Transcriptome Sequencing Project☆14Sep 18, 2018Updated 7 years ago