Check and score C/C++ software quality
☆68May 27, 2023Updated 3 years ago
Alternatives and similar repositories for softwipe
Users that are interested in softwipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 3 years ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆16Aug 1, 2026Updated 2 months ago
- ☆14Jan 31, 2020Updated 6 years ago
- ☆24Apr 2, 2021Updated 5 years ago
- CodeHawk C Analyzer: sound static analysis of memory safety (undefined behavior)☆33Jun 19, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- URMAP ultra-fast read mapper☆38Jun 15, 2020Updated 6 years ago
- An aid for developing correct WebAssembly implementations through generative fuzzing☆15Aug 30, 2022Updated 4 years ago
- Python-like decorator in Rust☆15May 14, 2020Updated 6 years ago
- ☆44Nov 20, 2021Updated 4 years ago
- Detects human contamination in bam files☆16Sep 10, 2020Updated 6 years ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 7 months ago
- A more efficient quality control tool for sequencing data☆33May 27, 2025Updated last year
- Comparison of Adaptive Immune Receptor Repertoires☆30Jan 29, 2025Updated last year
- RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures☆12Jun 5, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 🧬 Viral genome reference alignment☆12Jan 26, 2021Updated 5 years ago
- Fast alignment tool based on bwa-mem☆29Feb 22, 2026Updated 7 months ago
- Dynamic Hashed Blocks (DHB) data structure for dynamic graphs☆13Sep 23, 2026Updated 2 weeks ago
- RabbitMash: an efficient highly optimized implementation of Mash.☆20Oct 28, 2023Updated 2 years ago
- ☆15Dec 8, 2022Updated 3 years ago
- A FASTQ lossless compression algorithm especially designed for nanopore sequencing FASTQ files.☆10Jul 2, 2020Updated 6 years ago
- ☆26Oct 17, 2018Updated 7 years ago
- AC-DIAMOND is a DNA-protein alignment tool☆17Oct 11, 2023Updated 2 years ago
- BioGraph: an online service and a graph DB for querying and analyzing bioinformatics resources☆11Oct 18, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using …☆31Oct 1, 2026Updated last week
- REplicated STORagE☆13Mar 23, 2023Updated 3 years ago
- Materials for the talk "Python already has a frontend for your compiler" at PiterPy 2023☆21Dec 30, 2023Updated 2 years ago
- GPU implementation of the Wavefront Alignment Algorithm for global, gap-affine, pairwise sequence alginment☆42Apr 30, 2025Updated last year
- Just a python fasta/q parser based on kseq.h☆14Jul 13, 2020Updated 6 years ago
- A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing☆21Sep 21, 2026Updated 2 weeks ago
- A fast, AVX2 and ARM Neon accelerated FM index library☆36Dec 9, 2024Updated last year
- Generate interactive dotplot from mummer4 output using plotly☆28Feb 29, 2020Updated 6 years ago
- AStarix: Fast and Optimal Sequence-to-Graph Aligner☆74Dec 25, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ASTRAL for PaRalogs and Orthologs☆24Sep 13, 2022Updated 4 years ago
- The new version is available at https://github.com/RabbitBio/RabbitQCPlus☆25Jun 20, 2022Updated 4 years ago
- MONI: A Pangenomic Index for Finding MEMs☆38Mar 25, 2025Updated last year
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- Banded Striped DNA Sequence Alignment☆54May 9, 2023Updated 3 years ago
- LoFreq Star: Sensitive variant calling from sequencing data☆111Oct 16, 2025Updated 11 months ago
- Location of structural errors in a genome assembly and structural variations between a pair of genomes☆11Sep 27, 2019Updated 7 years ago