CDCgov / cfa-gam-rtLinks
R package for real-time Rt estimation with penalized splines
☆15Updated 3 weeks ago
Alternatives and similar repositories for cfa-gam-rt
Users that are interested in cfa-gam-rt are comparing it to the libraries listed below
Sorting:
- ☆13Updated 3 weeks ago
- ☆10Updated last month
- ☆20Updated this week
- ☆11Updated 2 weeks ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Updated last year
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆27Updated 3 weeks ago
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆20Updated this week
- Estimate epidemiological delay distributions with brms☆15Updated 2 weeks ago
- Course on nowcasting and forecasting of infectious disease dynamics☆23Updated 3 weeks ago
- ☆10Updated 4 months ago
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆23Updated last week
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Updated last week
- Create Contact Matrices from Population Data☆20Updated this week
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆63Updated 2 weeks ago
- Data and statistical models for biomarker shedding.☆15Updated this week
- ☆23Updated 7 months ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated 2 years ago
- US RSV Forecast Hub☆12Updated last week
- Repository to the R package nowcaster, nowcasting with INLA☆22Updated 4 months ago
- An R package for Bayes Linear emulation and history matching.☆18Updated 2 months ago
- ☆43Updated 5 months ago
- ☆32Updated 2 weeks ago
- Nowcasting by Bayesian Smoothing☆18Updated 8 months ago
- Additional censored event tools for Distributions.jl☆13Updated 2 months ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17Updated last year
- Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub☆50Updated this week
- Utilities for Scoring and Assessing Predictions☆60Updated 2 weeks ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 3 years ago
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆35Updated 3 weeks ago
- An R package for the analysis of infectious disease transmission data☆10Updated 4 years ago