cmu-delphi / epiforecast-R
R package to implement and visualize several epidemiological forecasting methods.
☆21Updated 7 months ago
Alternatives and similar repositories for epiforecast-R:
Users that are interested in epiforecast-R are comparing it to the libraries listed below
- FluSight Forecast Submissions☆18Updated 9 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Updated last year
- Infectious disease model library and utilities☆15Updated 2 years ago
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆18Updated 3 years ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated 5 months ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆17Updated 2 months ago
- R Code for Causal Inference by Hernán and Robins☆22Updated 3 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆13Updated last week
- CRAN Task View: Epidemiology☆23Updated 3 weeks ago
- Short course on parametric survival analysis☆15Updated 2 months ago
- Create Contact Matrices from Population Data☆19Updated 2 weeks ago
- Repo for the LSHTM R Users Group (RUG)☆9Updated 3 years ago
- An R package with Dynamic Models of infectious diseases☆29Updated 3 months ago
- Tools for building predictive models in epidemiology.☆11Updated this week
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆11Updated 2 years ago
- statistical models to analyze diagnostic tests☆15Updated 4 years ago
- Analysing epidemic trends using AutoML approaches.☆18Updated 3 years ago
- Monte-Carlo State Space Models☆19Updated 7 months ago
- R tools for monitoring effectiveness of COVID-19 control efforts☆12Updated 4 years ago
- outbreaks: an R package compiling disease outbreak data☆51Updated 2 years ago
- ☆40Updated 7 months ago
- Code for the R package "EValue" and GUI website.☆14Updated 3 years ago
- 📦 Your One Stop to Targeted Learning in R with the tlverse☆33Updated 3 years ago
- Flexible Markov chain monte carlo via reparameterization☆12Updated 7 months ago
- R Package of methods and data for spatial epidemiology☆31Updated last year
- Compute and visualise incidence (reworking of the original incidence package)☆17Updated 2 months ago
- Repository for the R for Epidemiology book☆23Updated 6 months ago