Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.
☆13Jan 27, 2024Updated 2 years ago
Alternatives and similar repositories for CAME
Users that are interested in CAME are comparing it to the libraries listed below
Sorting:
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆10Oct 30, 2023Updated 2 years ago
- Deep Learning Theory course☆28Jan 3, 2022Updated 4 years ago
- Code for "Whole brain alignment of spatial transcriptomics between humans and mice with BrainAlign"☆15Oct 4, 2024Updated last year
- R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)☆15Aug 24, 2023Updated 2 years ago
- ☆25Aug 5, 2025Updated 7 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆27Nov 12, 2024Updated last year
- SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.☆88Dec 26, 2025Updated 2 months ago
- ☆10Dec 17, 2019Updated 6 years ago
- A package for the analysis of Imaging Mass Cytometry data☆14Jan 21, 2026Updated last month
- EasyTier for HarmonyOS NEXT☆16Oct 14, 2025Updated 4 months ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 5 years ago
- Python implementation of the 15 puzzle game☆10Dec 30, 2016Updated 9 years ago
- ☆15Oct 14, 2025Updated 4 months ago
- Biwhitened PCA☆14Feb 3, 2026Updated last month
- visualization tools for exon/junction coverage☆11Dec 30, 2019Updated 6 years ago
- Segmentation-free Analysis of In Situ Capture data☆14Jan 5, 2026Updated 2 months ago
- Enabling differential allele-specific analysis☆11Dec 28, 2024Updated last year
- Imagen databank operations☆11Oct 29, 2024Updated last year
- Codes to regenerate figures for mutagen paper☆12Apr 8, 2021Updated 4 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆11Feb 26, 2026Updated last week
- ☆10Nov 29, 2022Updated 3 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning☆11Mar 19, 2024Updated last year
- auth client for yuque oauth app☆10Jul 13, 2023Updated 2 years ago
- ☆21Jan 28, 2025Updated last year
- Inferring selection in cancer sequencing data using ABC and population based simulations☆12Jan 31, 2021Updated 5 years ago
- An implementation of Mask R-CNN designed for single-cell instance segmentation in the context of multiplexed tissue imaging☆11May 18, 2022Updated 3 years ago
- ☆11Nov 12, 2025Updated 3 months ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Apr 23, 2024Updated last year
- Some NGS workflow created by snakemake☆14Jan 15, 2025Updated last year
- Code for TAD_SV project☆11Mar 16, 2022Updated 3 years ago
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 9 years ago
- Annotating epigenetic variation among samples with region sets in R☆11Jan 18, 2025Updated last year
- Optimal gating strategies for flow and mass cytometry.☆16Nov 5, 2025Updated 4 months ago
- Pipeline for homeobox gene identification☆11Aug 8, 2023Updated 2 years ago
- A tutorial on NMFreg applied to cerebellum data.☆12Apr 7, 2020Updated 5 years ago