Alternatives and similar repositories for MaskRCNN_cell

Users that are interested in MaskRCNN_cell are comparing it to the libraries listed below

• overlapping-instances / MultiStar
  ☆10Updated 5 years ago
• tpecot / WholeSlideImageAnalysisWithQuPath
  ☆30Updated 2 weeks ago
• maweigert / neubias_academy_stardist
  ☆31Updated 4 years ago
• kukionfr / VAMPIRE_open
  open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition
  ☆31Updated 3 years ago
• ksugar / qupath-extension-cellsparse
  QuPath extension for Cellsparse
  ☆19Updated 9 months ago
• HMS-IDAC / UnMicst
  UNet script, model, sample data
  ☆14Updated 11 months ago
• maxpmx / CelloType
  End-to-end model for cell segmentation and classification
  ☆23Updated last year
• jiyuuchc / cellcutter
  ☆19Updated last year
• djimenezsanchez / NaroNet
  Trained only with subject-level labels, NaroNet discovers phenotypes, neighborhoods, and areas with the highest influence when classifyin…
  ☆20Updated 2 years ago
• labsyspharm / palom
  Piecewise alignment for layers of mosaics
  ☆35Updated 5 months ago
• BiomedicalMachineLearning / HEMnet
  A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues
  ☆32Updated last year
• ShahiraAbousamra / til_classification
  ☆16Updated 2 years ago
• biocompibens / pySpacell
  A Python package for single-cell spatial image analysis.
  ☆18Updated 2 years ago
• cellimnet / scellseg-publish
  A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.
  ☆10Updated last year
• hubmapconsortium / codex-pipeline
  CODEX data processing code
  ☆12Updated 7 months ago
• TissUUmaps / TissUUmaps
  TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…
  ☆66Updated 2 months ago
• qupath / qupath-extension-align
  QuPath extension to interactively align images
  ☆26Updated 6 months ago
• MIAnalyzer / MIA
  Microsopic Image Analyzer (MIA)
  ☆28Updated 5 months ago
• uhlmanngroup / splinedist
  SplineDist: Automated Cell Segmentation with Spline Curves
  ☆70Updated last year
• tanlabcode / CelloType
  ☆60Updated 11 months ago
• KerenLab / CellSighter
  ☆37Updated 2 years ago
• labsyspharm / minerva_analysis
  ☆27Updated 3 months ago
• swetabiox / Bioimage-Analysis-Resources
  A collection of resources on bioimage analysis and related tools and techniques
  ☆14Updated 2 years ago
• ciccalab / SIMPLI
  SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
  ☆39Updated 4 months ago
• ValeAri / HEIP
  ☆12Updated 10 months ago
• CamaraLab / CAJAL
  A Python package using Gromov-Wasserstein distance to compare cell shapes
  ☆22Updated 2 weeks ago
• qupath / qupath-extension-instanseg
  The official QuPath extension for InstanSeg
  ☆29Updated 2 weeks ago
• niaid / sitk-ibex
  Aligning images acquired with the IBEX microscopy imaging technique
  ☆19Updated last month
• michaellee1 / CellSeg
  ☆24Updated 2 years ago
• nygctech / PICASSO
  Development of PICASSO plugin for napari
  ☆16Updated 3 years ago