The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠
☆174Jan 15, 2026Updated last month
Alternatives and similar repositories for ENIGMA
Users that are interested in ENIGMA are comparing it to the libraries listed below
Sorting:
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆243Feb 9, 2026Updated 3 weeks ago
- A toolbox for comparing brain maps☆319Apr 23, 2025Updated 10 months ago
- Useful tools from the Network Neuroscience Lab☆109Jan 29, 2026Updated last month
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆116Feb 20, 2026Updated last week
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆112Sep 3, 2024Updated last year
- Data and code supporting Hansen et al., 2022, Nature Communications, "Local molecular and global connectomic contributions to cross-disor…☆25Sep 22, 2022Updated 3 years ago
- A statistics and context decoding toolbox for neuroimaging.☆116Jan 30, 2026Updated last month
- ☆714Sep 19, 2025Updated 5 months ago
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆65Feb 26, 2026Updated last week
- Code and documentation supporting Markello & Misic, 2021, "Comparing spatial null models for brain maps" (NeuroImage)☆23Apr 25, 2021Updated 4 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆15Jul 1, 2024Updated last year
- ☆213Jun 23, 2023Updated 2 years ago
- Python interface for generating coordinate tables and region labels from statistical MRI images☆116Feb 23, 2026Updated last week
- Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity☆56Jun 17, 2024Updated last year
- Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)☆17Nov 5, 2023Updated 2 years ago
- ☆51Nov 23, 2021Updated 4 years ago
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆19May 30, 2025Updated 9 months ago
- R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphom…☆73Feb 18, 2026Updated 2 weeks ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆29Aug 13, 2020Updated 5 years ago
- ☆144Jul 5, 2025Updated 8 months ago
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆84May 9, 2025Updated 9 months ago
- brainPlot is a MATLAB function to create simple line-art brain plots.☆106Sep 9, 2021Updated 4 years ago
- MATLAB code for reading and writing CIFTI connectivity files☆69Feb 25, 2026Updated last week
- ☆107Jul 23, 2017Updated 8 years ago
- Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.☆198Oct 16, 2025Updated 4 months ago
- Morphometric similarity in psychosis- data and code☆52May 8, 2019Updated 6 years ago
- Processing pipelines for the HCP☆636Updated this week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Feb 23, 2026Updated last week
- Standard human cortical surface-based template for neuroimaging analyses (Freesurfer, left-right-symmetric, ~32k vertices) v☆54Sep 26, 2023Updated 2 years ago
- A package to create simple 3D network visualizations on a brain.☆84Aug 18, 2025Updated 6 months ago
- MATLAB toolbox for visualizing brain data on surfaces.☆36Dec 19, 2024Updated last year
- Toolbox for structural and functional brain connectivity reconstruction.☆18Oct 21, 2024Updated last year
- A package for publication-ready brain surface figures☆70Nov 18, 2025Updated 3 months ago
- brain connectivity toolbox for python☆333Nov 25, 2025Updated 3 months ago
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆35Jul 22, 2025Updated 7 months ago
- Plotting tool for brain atlases, in ggplot☆255Feb 19, 2026Updated 2 weeks ago
- An extended Human Connectome Project multimodal parcellation atlas of the human cortex and subcortical areas☆42Sep 24, 2024Updated last year
- Connectome Workbench☆216Updated this week
- Brainconn - an R package for visualising brain connectivity data in 2D and interactive 3D☆64Sep 18, 2025Updated 5 months ago