ahheckel / FSL-scripts
Script-framework using FSL, Freesurfer and AFNI functionality for automatization and high-throughput processing of MRI data in clustered environments.
☆33Updated 8 years ago
Alternatives and similar repositories for FSL-scripts:
Users that are interested in FSL-scripts are comparing it to the libraries listed below
- Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs o…☆40Updated 8 years ago
- The Midnight Scanning Club Codebase☆33Updated 5 years ago
- ComBat Family of Harmonization Methods☆18Updated 6 months ago
- Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.☆43Updated last year
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆44Updated 8 months ago
- Subtype and Stage Inference [Young+, Nature Communications 2018]☆12Updated 3 years ago
- Maps gene samples into surface parcellation☆19Updated 7 years ago
- ☆35Updated 3 years ago
- Tools for mesh surface-based operations☆35Updated 3 weeks ago
- Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon☆32Updated 6 years ago
- Toolbox for the analysis of cerebellar imaging data☆19Updated 8 months ago
- BRAinNetome fMRI Toolkit -- MATLAB scripts/GUIs for fMRI data pre-/post-processes☆15Updated 4 years ago
- Displays regional stats on Freesurfer surfaces in MATLAB☆15Updated 4 years ago
- Handy scripts for SPM☆73Updated 4 years ago
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆36Updated 6 years ago
- Connectome Computation System☆75Updated 6 months ago
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data☆18Updated 2 years ago
- Public repository of cmig_tools including FEMA☆24Updated 4 months ago
- This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…☆52Updated 4 years ago
- A prediction-based extension of network-based statistics.☆32Updated last month
- Morphometric similarity in psychosis- data and code☆44Updated 5 years ago
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 4 months ago
- MarsBaR region of interest toolbox for SPM☆23Updated 2 months ago
- Code and documentation supporting Markello & Misic, 2021, "Comparing spatial null models for brain maps" (NeuroImage)☆20Updated 3 years ago
- Data and code supporting Hansen et al., 2022, Nature Communications, "Local molecular and global connectomic contributions to cross-disor…☆22Updated 2 years ago
- Load fMRIprep confounds in python☆36Updated 3 years ago
- nii_preprocess adapted for LARC and ABC studies at UofSC☆22Updated 3 years ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 4 months ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆16Updated 8 months ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆22Updated 9 months ago