Alternatives and similar repositories for WGSExtract-Dev

Users that are interested in WGSExtract-Dev are comparing it to the libraries listed below

• apriha / snps
  tools for reading, writing, merging, and remapping SNPs
  ☆109Updated 5 months ago
• mentatpsi / OSGenome
  An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies
  ☆135Updated last year
• apriha / lineage
  tools for genetic genealogy and the analysis of consumer DNA test results
  ☆169Updated last month
• plantimals / 2vcf
  convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
  ☆58Updated 5 years ago
• 23andMe / seqseek
  Easy access to human reference genome sequences
  ☆57Updated 2 years ago
• WGSExtract / WGSExtract.github.io
  WGS Extract WWW home
  ☆41Updated 3 months ago
• ncbi / tree-tool
  Incremental building of phylogenetic distance trees
  ☆25Updated last week
• iobio / gene.iobio
  Gene.iobio vue
  ☆63Updated last week
• joepickrell / phenopredict21
  Command line tool to predict phenotype from VCF (gets models from pheno-server-21)
  ☆16Updated 9 years ago
• stevenliuyi / admix
  an admixture analysis tool for Python that supports raw data from 23andme, AncestryDNA, etc.
  ☆68Updated 3 years ago
• plashchynski / awesome-genetics
  A curated list of awesome personal genomics software, libraries, and educational resources.
  ☆138Updated last year
• labdao / openlab-cli
  Openlab - decentralised bioinformatics services - from the command line.
  ☆20Updated 2 years ago
• ncbi / ncbi-vdb
  ncbi-vdb
  ☆92Updated this week
• cov-lineages / pangoLEARN
  Store of the trained model for pangolin to access.
  ☆55Updated 2 years ago
• Orion1618 / Odyssey
  Odyssey: A semi-automated pipeline for the prepping, cleaning, phasing, imputing, analyzing, and visualizing genomic data
  ☆19Updated 4 years ago
• 23andMe / yhaplo
  Identifying Y-chromosome haplogroups in arbitrarily large samples of sequenced or genotyped men
  ☆111Updated 3 weeks ago
• lucapinello / CRISPResso
  Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
  ☆135Updated 6 years ago
• nextstrain / nextclade
  Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
  ☆243Updated 2 weeks ago
• cobilab / cryfa
  A secure encryption tool for genomic data
  ☆63Updated last year
• genometools / genometools
  GenomeTools genome analysis system.
  ☆321Updated last year
• arrogantrobot / 23andme2vcf
  convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf
  ☆98Updated 6 years ago
• brentp / peddy
  genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
  ☆141Updated last month
• czbiohub-sf / orpheum
  Orpheum (Previously called and published under sencha) is a Python package for directly translating RNA-seq reads into coding protein seq…
  ☆18Updated 2 years ago
• tkrahn / extract23
  Extract a simulated 23andMe (V3) style file from a Whole Genome BAM file
  ☆31Updated 5 months ago
• bcgsc / abyss
  Assemble large genomes using short reads
  ☆323Updated 5 months ago
• statgen / Minimac4
  ☆66Updated 2 months ago
• cwarden45 / DTC_Scripts
  Scripts to Analyze DTC Sequencing and Genotyping Data (and some comparisons to Veritas WGS data)
  ☆20Updated 9 months ago
• mitoNGS / MToolBox
  A bioinformatics pipeline to analyze mtDNA from NGS data
  ☆93Updated last year
• cslarsen / arv
  A fast 23andMe DNA parser and inferrer for Python
  ☆121Updated 5 years ago
• arvkevi / ezancestry
  Easy genetic ancestry predictions in Python
  ☆65Updated 2 months ago