Alternatives and similar repositories for lineage

Users that are interested in lineage are comparing it to the libraries listed below

• apriha / snps
  tools for reading, writing, merging, and remapping SNPs
  ☆111Updated 8 months ago
• plashchynski / awesome-genetics
  A curated list of awesome personal genomics software, libraries, and educational resources.
  ☆143Updated last year
• plantimals / 2vcf
  convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
  ☆59Updated 6 years ago
• 23andMe / seqseek
  Easy access to human reference genome sequences
  ☆56Updated 2 years ago
• arrogantrobot / 23andme2vcf
  convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf
  ☆98Updated 6 years ago
• openSNP / snpr
  The sources of the openSNP website
  ☆178Updated 6 months ago
• 23andMe / yhaplo
  Identifying Y-chromosome haplogroups in arbitrarily large samples of sequenced or genotyped men
  ☆116Updated this week
• arvkevi / ezancestry
  Easy genetic ancestry predictions in Python
  ☆65Updated 5 months ago
• audy / bioinformatics-hacks
  Scripts for miscelleneous bioinformatics tasks
  ☆49Updated 5 years ago
• ncbi / dbsnp
  dbSNP
  ☆141Updated last year
• chapmanb / cloudbiolinux
  CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
  ☆257Updated last year
• lucapinello / CRISPResso
  Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
  ☆137Updated 6 years ago
• ncbi / ncbi-vdb
  ncbi-vdb
  ☆92Updated this week
• stevenliuyi / admix
  an admixture analysis tool for Python that supports raw data from 23andme, AncestryDNA, etc.
  ☆71Updated 3 years ago
• konradjk / exac_browser
  Browser for ExAC consortium data
  ☆106Updated 3 years ago
• arq5x / gemini
  a lightweight db framework for exploring genetic variation.
  ☆323Updated 5 years ago
• mentatpsi / OSGenome
  An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies
  ☆136Updated last year
• verilylifesciences / genomewarp
  GenomeWarp translates genetic variants from one genome assembly version to another.
  ☆97Updated 2 years ago
• NCBI-Hackathons / Community_Software_Tools_for_NGS
  ☆63Updated 9 years ago
• genometools / genometools
  GenomeTools genome analysis system.
  ☆325Updated last week
• brentp / peddy
  genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
  ☆144Updated 4 months ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆101Updated 2 months ago
• tkrahn / extract23
  Extract a simulated 23andMe (V3) style file from a Whole Genome BAM file
  ☆33Updated 8 months ago
• nf-core / tools
  Python package with helper tools for the nf-core community.
  ☆281Updated this week
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago
• broadinstitute / seqr
  web-based analysis tool for rare disease genomics
  ☆195Updated this week
• cslarsen / arv
  A fast 23andMe DNA parser and inferrer for Python
  ☆121Updated 6 years ago
• superbobry / snpy
  A wrapper-library for reading openSNP data
  ☆49Updated 7 years ago
• GMOD / Apollo
  Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
  ☆137Updated 5 months ago
• DataBiosphere / terra-interoperability-model
  Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse
  ☆20Updated 3 years ago