samtools / bcftoolsLinks
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
☆819Updated 2 weeks ago
Alternatives and similar repositories for bcftools
Users that are interested in bcftools are comparing it to the libraries listed below
Sorting:
- A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.☆537Updated 6 months ago
- The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants☆510Updated last week
- bedtools - the swiss army knife for genome arithmetic☆1,007Updated 8 months ago
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.☆852Updated 5 months ago
- The next version of bwa-mem☆795Updated last month
- A quality control analysis tool for high throughput sequencing data☆553Updated 2 weeks ago
- Specifications of SAM/BAM and related high-throughput sequencing file formats☆688Updated 2 weeks ago
- Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations☆703Updated 2 weeks ago
- A fast and sensitive gapped read aligner☆751Updated 2 months ago
- The second version of the Kraken taxonomic sequence classification system☆846Updated 2 weeks ago
- C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings☆660Updated 3 weeks ago
- C library for high-throughput sequencing data formats☆889Updated last week
- Transcript assembly and quantification for RNA-Seq☆471Updated last week
- Haplotype VCF comparison tools☆450Updated last year
- A single molecule sequence assembler for genomes large and small.