Alternatives and similar repositories for mprod_package

Users that are interested in mprod_package are comparing it to the libraries listed below

• merlebehr / treeSeg
  Implementation of the treeSeg algorithm as an R package.
  ☆14Updated 3 years ago
• stephenslab / fastglmpca
  Fast algorithms for GLM-PCA.
  ☆14Updated 2 months ago
• shchurch / countland
  tools in python and R for analyzing biological count data, especially from single cell RNAseq
  ☆22Updated last year
• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆13Updated last month
• csoneson / treeclimbR
  ☆20Updated last month
• BIGslu / kimma
  Kinship In Mixed Model Analysis of RNA-seq
  ☆12Updated last month
• himelmallick / Tweedieverse
  Differential analysis of multi-omics data based on the Tweedie distribution
  ☆28Updated 9 months ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago
• guokai8 / microbial
  Do microbiome analysis with dada2 and phyloseq object
  ☆13Updated 7 months ago
• pachterlab / sleuth_walkthroughs
  Some sleuth walkthroughs to help you get started
  ☆10Updated 6 years ago
• MinJinHa / COZINE
  COmpositional Zero-Inflated Network Estimation
  ☆10Updated last year
• gusevlab / hsq_ancestry_examples
  Toy simulations and analyses of heritability and genetic differences
  ☆11Updated 10 months ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated 2 years ago
• ngs-docs / 2021-GGG298
  Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis
  ☆13Updated 4 years ago
• vdblab / FLORAL
  Fit LOg-RAtio Lasso regression for compositional covariates
  ☆13Updated last month
• Gibbons-Lab / mbtools
  R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.
  ☆23Updated last year
• jsevo / taxumap
  ☆16Updated last year
• csoneson / compcodeR
  ☆12Updated last month
• seandavi / MachineLearningIntro
  Machine learning use cases for teaching
  ☆13Updated 7 years ago
• mcalgaro93 / sc2meta
  Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…
  ☆10Updated 4 years ago
• aametwally / MetaLonDA
  METAgenomic LONgitudinal Differential Abundance method
  ☆16Updated 5 years ago
• YuLab-SMU / ggtreeDendro
  Drawing 'dendrogram' using 'ggtree'
  ☆13Updated last month
• jsilve24 / fido
  Multinomial Logistic-Normal Models (really fast)
  ☆20Updated 2 months ago
• CenterForStatistics-UGent / SPsimSeq
  Semi-parametric simulation of bulk and single cell RNA-seq data
  ☆10Updated 6 months ago
• UtaDaphniaLab / Gene_Annotation_Easy_Viewer
  Tool to help visualize data after BLAST by generating pathways on KEGG using an input file of genes and their associated KEGG accession.
  ☆11Updated 3 years ago
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated last month
• StoreyLab / superSeq
  Assessing the increase in power from increasing read depth in a given RNA-Seq study
  ☆13Updated 6 years ago
• reptalex / phylofactor
  ☆27Updated last year
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆28Updated 2 weeks ago