Alternatives and similar repositories for mprod_package

Users that are interested in mprod_package are comparing it to the libraries listed below

• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆14Updated 5 months ago
• himelmallick / Tweedieverse
  Differential analysis of multi-omics data based on the Tweedie distribution
  ☆28Updated last month
• gtonkinhill / TCGA_analysis
  ☆26Updated 2 years ago
• csoneson / treeclimbR
  ☆20Updated 2 months ago
• shchurch / countland
  tools in python and R for analyzing biological count data, especially from single cell RNAseq
  ☆22Updated last year
• merlebehr / treeSeg
  Implementation of the treeSeg algorithm as an R package.
  ☆14Updated 3 years ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 7 years ago
• jsilve24 / fido
  Multinomial Logistic-Normal Models (really fast)
  ☆20Updated 10 months ago
• aametwally / MetaLonDA
  METAgenomic LONgitudinal Differential Abundance method
  ☆16Updated 6 years ago
• Gibbons-Lab / mbtools
  R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.
  ☆24Updated last year
• reptalex / phylofactor
  ☆28Updated last year
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆30Updated 8 months ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago
• mcalgaro93 / sc2meta
  Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…
  ☆10Updated 5 years ago
• CharlieCarpenter / tidyMicro
  tidyMicro GitHup Repository
  ☆21Updated 4 years ago
• vdblab / FLORAL
  Fit LOg-RAtio Lasso regression for compositional covariates
  ☆14Updated last month
• guokai8 / microbial
  Do microbiome analysis with dada2 and phyloseq object
  ☆14Updated last year
• jtleek / sva-devel
  ☆28Updated last year
• shaunpwilkinson / kmer
  K-mer Counting for Biological Sequence Analysis
  ☆27Updated 6 years ago
• ngs-docs / 2021-GGG298
  Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis
  ☆12Updated 4 years ago
• gusevlab / hsq_ancestry_examples
  Toy simulations and analyses of heritability and genetic differences
  ☆11Updated last year
• pixushi / tempted
  ☆17Updated last year
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated last month
• MinJinHa / COZINE
  COmpositional Zero-Inflated Network Estimation
  ☆11Updated 2 years ago
• multimeric / TidyMultiqc
  Converts 'MultiQC' Reports into Tidy Data Frames
  ☆19Updated last year
• Arcadia-Science / seqqc
  A Nextflow pipeline to identify quality control issues with new sequencing data.
  ☆28Updated 2 years ago
• jgolob / maliampi
  Maximum Likelihood Amplicon Pipeline
  ☆22Updated last year
• zhouhj1994 / LinDA
  ☆38Updated 2 years ago
• shihuang047 / age-prediction
  ☆22Updated 5 years ago
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆25Updated 2 years ago