Xiaoshunxin / MPK-GNNLinks
Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis
☆11Updated 2 years ago
Alternatives and similar repositories for MPK-GNN
Users that are interested in MPK-GNN are comparing it to the libraries listed below
Sorting:
- VAE package for reproducible generative models of biological data☆12Updated 10 months ago
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆17Updated 5 years ago
- Graph Neural Network model for survival analysis from multi-omics data☆14Updated 3 years ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆17Updated 2 years ago
- Multi-omics biomarker discovery tool exploiting a gene-gene interaction network☆16Updated last year
- A data analysis package for high-dimensional, multi-block data.☆12Updated 3 years ago
- SUPREME: A GCN based approach for cancer subtype prediction☆18Updated 2 years ago
- Source code for integrative nonnegative matrix factorization☆19Updated 7 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆31Updated 6 months ago
- A deep-learning framework for multi-omics integration☆27Updated 2 years ago
- ☆21Updated 6 months ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Updated 5 years ago
- Multi-omics integration method using AE and GCN☆37Updated 2 years ago
- Immune Profiling of Atherosclerotic Plaques Identifies☆10Updated 2 years ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Updated 6 years ago
- Similarity Network Fusion☆34Updated 10 years ago
- Deep Learning-based Clustering Approaches for Bioinformatics☆141Updated 4 years ago
- Single-cell archetypal analysis neural network☆15Updated 3 years ago
- ETL UK-Biobank☆16Updated 2 years ago
- Drug-disease proximity based therapeutic effect screening and analysis☆19Updated 8 years ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆33Updated 6 years ago
- ☆67Updated last year
- ☆49Updated 2 months ago
- Pathformer: biological pathway informed transformer model☆33Updated last year
- Immunology Informatics - Big Data Analysis in Immunology - Tutorials☆23Updated 8 years ago
- a light structured Residual autoencoder and mutual nearest neighbor Paring guided Adversarial Network for scRNA-seq batch correction☆15Updated 2 years ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆13Updated 4 years ago
- InspectOmop is a lightweight python 3 package that assists in the extraction of electronic health record(EHR) data from relational databa…☆14Updated 7 months ago
- Classification of Single cells by Transfer Learning☆10Updated 4 years ago
- ☆24Updated 4 years ago