molbiodiv / meta-barcoding-dual-indexingLinks
Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods
☆10Updated 3 years ago
Alternatives and similar repositories for meta-barcoding-dual-indexing
Users that are interested in meta-barcoding-dual-indexing are comparing it to the libraries listed below
Sorting:
- R package for downstream analysis for anacapa eDNA pipeline☆22Updated 4 years ago
- Pairwise multilevel comparison using adonis☆80Updated 2 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Updated 3 months ago
- ☆227Updated 2 weeks ago
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆145Updated 10 months ago
- Species richness with high diversity☆68Updated 4 months ago
- This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…☆69Updated last year
- JAMP - Just Another Metabarcoding Pipeline☆37Updated 3 years ago
- Using Digitized Collections-Based Data in Research: Applications for Ecology, Phylogenetics, and Biogeography Botany 2025.☆14Updated 4 months ago
- Look Up Guild Information for Fungi in R☆22Updated 8 months ago
- code for Numerical Ecology with R☆35Updated 7 years ago
- R tools for integrating phylogenies and ecology☆37Updated last year
- LoD calculator☆23Updated 6 years ago
- ggplot-based plots for vegan☆117Updated 8 months ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆12Updated 3 years ago
- Species occurrence dot maps in R☆21Updated 3 years ago
- Analysis code for a manuscript on community similarity computation☆14Updated 6 years ago
- Phylogenetic analysis in R☆212Updated last month
- R package MiscMetabar: Miscellaneous functions for metabarcoding analysis☆19Updated 2 weeks ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆34Updated 6 years ago
- A Landscape Genomic Analysis Toolkit in R☆20Updated 3 weeks ago
- Examples of application of comparative methods in R☆60Updated 3 years ago
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated last month
- adegenet: a R package for the multivariate analysis of genetic markers☆198Updated 10 months ago
- Microbial community analysis tools in R☆22Updated 3 years ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆149Updated 2 years ago
- diversity estimation under ecological networks☆83Updated 4 months ago
- Informatic Sequence Classification Trees☆15Updated 6 months ago
- Various functions for analysis of microbial community data☆47Updated 2 months ago
- ☆13Updated 10 months ago