Tong-Chen / Bioinfo_course_python

Related projects ⓘ

Alternatives and complementary repositories for Bioinfo_course_python

• xuzhougeng / R-ChIP-data-analysis
  ☆51Updated 6 years ago
• Tong-Chen / Bioinfo_course_R
  ☆35Updated 7 months ago
• Tong-Chen / NGS
  Scripts for next generation sequencing
  ☆47Updated 4 years ago
• xuzhougeng / org.Osativa.eg.db
  ☆19Updated 5 years ago
• menghaowei / ngstools
  My own tools code for NGS data analysis (Next Generation Sequencing)
  ☆29Updated 5 years ago
• kernco / functional-annotation
  Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
  ☆22Updated 2 years ago
• junjunlab / GetTransTool
  Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.
  ☆19Updated 2 years ago
• guoweilong / cgmaptools
  toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
  ☆62Updated 10 months ago
• jmzeng1314 / cnv
  ☆32Updated 6 years ago
• Hua-CM / HuaSmallTools
  Some bioinformic domestic scripts.
  ☆34Updated last year
• Tong-Chen / s-plot
  A simple plot library
  ☆51Updated 7 years ago
• YongxinLiu / Liu2020ProteinCell
  Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
  ☆37Updated 4 years ago
• ththi / Microbial-Interkingdom-Suppl
  Scripts and data for Duran & Thiergart et al. Cell, 2018
  ☆24Updated 5 years ago
• PiaoyangGuohai1 / WES-analysis
  ☆21Updated last year
• ylipacbio / IsoSeq3
  IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
  ☆16Updated 6 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆31Updated 5 years ago
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆57Updated 10 months ago
• fudiyi / RNA-seq
  RNA-seq analysis
  ☆29Updated 3 years ago
• dekkerlab / cworld-dekker
  perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)
  ☆64Updated 5 years ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆51Updated 2 weeks ago
• dxsbiocc / Workflow
  The snakemake analysis workflow for bioinformatics
  ☆22Updated 5 months ago
• marvin-jens / find_circ
  tools to find circRNAs in RNA-seq data
  ☆40Updated 6 years ago
• BioinfoUNIBA / REDItools2
  ☆53Updated 3 years ago
• YongxinLiu / MicrobiomeProtocol
  Microbiome Protocol eBook related documents and scripts.
  ☆44Updated 3 years ago
• olarerin / metaPlotR
  A Perl/R pipeline for plotting metagenes
  ☆35Updated 3 years ago
• ENCODE-DCC / long-read-rna-pipeline
  ENCODE long read RNA-seq pipeline
  ☆44Updated last year
• MonashBioinformaticsPlatform / RSeQC
  fork of RSeQC python RNAseq metrics suit of tools
  ☆46Updated 5 years ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆24Updated 5 years ago
• BGI-shenzhen / BamDeal
  BamDeal: a comprehensive toolkit for bam manipulation
  ☆52Updated last year
• iprada / Circle-Map
  A method for circular DNA detection based on probabilistic mapping of ultrashort reads
  ☆62Updated 3 months ago