fudiyi / RNA-seq
RNA-seq analysis
☆29Updated 3 years ago
Alternatives and similar repositories for RNA-seq:
Users that are interested in RNA-seq are comparing it to the libraries listed below
- ☆50Updated 6 years ago
- ☆58Updated 3 years ago
- ☆20Updated 5 years ago
- New version of JACUSA -> 2.0☆24Updated this week
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆63Updated 9 months ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆48Updated last year
- Allele-specific alignment sorting☆55Updated 2 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year
- A pipeline to process m6A-seq data and down stream analysis.☆44Updated 4 years ago
- Helper scripts for biological data processing from Sentieon☆64Updated 6 months ago
- MutMap pipeline to identify causative mutations responsible for a phenotype☆53Updated 3 months ago
- release version☆51Updated 2 years ago
- tutorial on pggb☆34Updated 3 months ago
- The snakemake analysis workflow for bioinformatics☆24Updated 11 months ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆45Updated last month
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- ☆19Updated 4 years ago
- Go to☆36Updated 3 weeks ago
- Pipeline for Somatic Variant Calling with WES and WGS data☆21Updated last year
- Tutorial Website☆59Updated 4 years ago
- Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.☆25Updated 3 years ago
- FEELnc : FlExible Extraction of LncRNA☆87Updated 7 months ago
- Software for Quantifying Interspersed Repeat Expression☆55Updated 2 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆50Updated 5 years ago
- Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".☆9Updated 2 years ago
- HiC uniform processing pipeline☆59Updated last year
- tools to find circRNAs in RNA-seq data☆42Updated 7 years ago
- Scripts for next generation sequencing☆48Updated 5 years ago
- Long-read Isoform Quantification and Analysis☆39Updated last month
- Workflow for Building Microsynteny Networks☆53Updated 2 years ago