☆26Aug 15, 2025Updated last year
Alternatives and similar repositories for ERAST
Users that are interested in ERAST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆15Aug 27, 2023Updated 3 years ago
- ☆12Jun 12, 2023Updated 3 years ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆49Feb 23, 2021Updated 5 years ago
- Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method☆18Dec 29, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆34Nov 2, 2025Updated 10 months ago
- A machine learning approach to alignment filtering☆16Jun 18, 2026Updated 3 months ago
- ☆21Jul 12, 2026Updated 2 months ago
- A tool for motif annotation and visualization in tandem repeats.☆15May 26, 2025Updated last year
- ALignment Transformation EnviRonment☆12May 8, 2018Updated 8 years ago
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆12Feb 25, 2021Updated 5 years ago
- ☆48Oct 2, 2023Updated 2 years ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆18Oct 6, 2025Updated 11 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Phage Annotation using Protein Structures☆175Updated this week
- Inpactor2: LTR retrotransposon detector and classificator using Deep Learning☆30Jun 17, 2025Updated last year
- High throughput tool for tall and wide multiple sequence alignment.☆31Sep 5, 2026Updated last week
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated 3 months ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- A straightforward bioinformatic pipeline for detecting a bacterial strain in one or more metagenome(s).☆19Jul 10, 2018Updated 8 years ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated last year
- ☆42May 19, 2025Updated last year
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆111Sep 12, 2026Updated last week
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- Detection and classification selective sweep use domain adaptive model☆11Apr 29, 2024Updated 2 years ago
- ☆27Jun 27, 2026Updated 2 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆42Feb 15, 2025Updated last year
- ☆94Jul 31, 2026Updated last month
- circularMT creates pictures of the genomic arrangement of mitochondrial genomes☆18Jul 15, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Module and script to remove contamination in assembled genomes before submission to ncbi☆14Jul 28, 2025Updated last year
- ☆13Mar 8, 2024Updated 2 years ago
- defusion☆14Aug 24, 2021Updated 5 years ago
- A shiny application to visualize MCscan result☆37Jun 26, 2026Updated 2 months ago
- SplitsTree App☆134Updated this week
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆23Aug 9, 2026Updated last month
- MCHelper: An automatic tool to curate transposable element libraries☆50Aug 5, 2026Updated last month