TGAC / 361Division

Related projects: ⓘ

• jmzeng1314 / my-perl
  some short but practical PERL script in NGS data analysis
  ☆17Updated 6 years ago
• marvin-jens / find_circ
  tools to find circRNAs in RNA-seq data
  ☆40Updated 6 years ago
• ththi / Microbial-Interkingdom-Suppl
  Scripts and data for Duran & Thiergart et al. Cell, 2018
  ☆24Updated 5 years ago
• BIMSBbioinfo / Strategies_for_analyzing_BS-seq
  ☆8Updated 7 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆31Updated 5 years ago
• khuang28jhu / bs3
  BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
  ☆26Updated 5 years ago
• xflicsu / swDMR
  A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing
  ☆13Updated last year
• menghaowei / ngstools
  My own tools code for NGS data analysis (Next Generation Sequencing)
  ☆29Updated 5 years ago
• carringtonlab / TargetFinder
  Plant small RNA target prediction tool
  ☆25Updated 7 years ago
• xmao / kobas
  KOBAS: a command line tool for identifying significant pathways from genomic data
  ☆30Updated 14 years ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆17Updated 2 years ago
• slzhao / QC3
  QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.
  ☆31Updated 8 years ago
• hangelwen / miR-PREFeR
  microRNA PREdiction From small RNA-seq data
  ☆29Updated 6 years ago
• BSSeeker / BSseeker2
  A versatile aligning pipeline for bisulfite sequencing data
  ☆61Updated 5 years ago
• chrisamiller / readDepth
  R package for inferring copy number from read depth
  ☆30Updated last year
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆44Updated last year
• bioinform / rnacocktail
  ☆87Updated 3 years ago
• BioinfoUNIBA / QEdit
  RNA editing quantification in deep transcriptome data
  ☆15Updated last year
• guoweilong / cgmaptools
  toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
  ☆61Updated 8 months ago
• ndbrown6 / MSK-GRAIL-TECHVAL
  High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants
  ☆21Updated 4 years ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆24Updated 2 years ago
• ajmazurie / kegg-animate-pathway
  Command-line utility to color objects of a KEGG pathway with arbitrary colors
  ☆32Updated 9 years ago
• patidarr / ngs_pipeline
  Exome/Capture/RNASeq Pipeline Implementation using snakemake
  ☆45Updated 6 years ago
• NYU-BFX / lncRNA-screen
  lncRNA-screen
  ☆26Updated 7 years ago
• ZhangLabSZ / RES-Scanner
  RES-Scanner is a software package for genome-wide identification and annotation of RNA-editing sites for any species with matched RNA-Seq…
  ☆12Updated 8 years ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆23Updated 5 years ago
• likelet / PlotAppForTBtools
  A shiny app for TBtools data plot
  ☆29Updated 8 years ago
• jmzeng1314 / cnv
  ☆32Updated 6 years ago
• genome-vendor / bsmap
  Unofficial repo for software vendoring or packaging purposes
  ☆19Updated 6 years ago