Sydney-Informatics-Hub / BioinformaticsLinks
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common methods.
☆17Updated 4 months ago
Alternatives and similar repositories for Bioinformatics
Users that are interested in Bioinformatics are comparing it to the libraries listed below
Sorting:
- An R interface to the MEME Suite☆52Updated 4 months ago
- Isoform-level functional RNA-Seq analysis 🧬☆33Updated last week
- ☆22Updated last year
- Merge fastq files split over lanes☆20Updated 7 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- R package wrapping bedtools☆44Updated 7 months ago
- ☆29Updated last year
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆35Updated 3 years ago
- A tidyverse and grammar of graphics powered line traces visualizer☆30Updated last month
- mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate☆28Updated 4 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- An efficient way to guess the library type of your RNA-Seq data.☆32Updated 3 years ago
- An interactive web-tool for RNA-seq analysis☆69Updated 8 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated last week
- ☆33Updated 5 months ago
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆21Updated 4 years ago
- ☆29Updated 6 years ago
- ☆27Updated 2 years ago
- Evolutionary Transcriptomics with R☆46Updated last week
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆30Updated last year
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆23Updated 3 years ago
- documentation for trackViewer☆29Updated 6 years ago
- Genomic data interpretation and visualization Workshop☆21Updated last month
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Flexible Bayesian inference of mutational signatures☆36Updated 2 years ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 4 months ago