StochSS - Software as a Service for modeling, simulation, inference and analysis of biochemical models. https://live.stochss.se
☆25Jan 28, 2026Updated 7 months ago
Alternatives and similar repositories for stochss
Users that are interested in stochss are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python3 Toolkit for ML-assisted inference, optimization and parameter exploration.☆16May 15, 2023Updated 3 years ago
- Modeling toolkit for biochemical simulation☆84Jan 23, 2025Updated last year
- Stochastic reaction-diffusion simulation on unstructured meshes.☆30Feb 26, 2026Updated 6 months ago
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆28Dec 3, 2025Updated 9 months ago
- Fostering open source collaboration with technical writers.☆10Aug 17, 2019Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- COMBINE-compliant implementation of the Mycoplasma genitalium whole-cell model☆10Feb 29, 2016Updated 10 years ago
- A tool for creating Python implementations of SBML models.☆15Oct 5, 2022Updated 3 years ago
- Python package for building SBML models without needing to use libSBML.☆11Aug 18, 2021Updated 5 years ago
- The simMixedDAG package enables simulation of "real life" datasets from DAGs☆13Oct 12, 2019Updated 6 years ago
- A Java-based software for visualizing and translating the KEGG PATHWAY database. Conversion of KGML files into BioPAX, SBML, GraphML, GML…☆21Jun 26, 2023Updated 3 years ago
- cy3sbml: SBML for Cytoscape 3☆15Jan 22, 2026Updated 7 months ago
- The matching routine for interologs identification based on co-evolution☆11Jul 17, 2018Updated 8 years ago
- Web application enabling users and software to browse, upload, and share synthetic biology designs. This repository is a redesign of the …☆16Updated this week
- Bad link reporter for GitHub repositories☆13Aug 3, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simple microcanonical Molecular Dynamics simulation of a Lennard-Jones fluid in a periodic boundary☆10Jan 2, 2018Updated 8 years ago
- Synthetic Populations and Ecosystems of the World☆14Nov 3, 2017Updated 8 years ago
- GPU accelerated integrator for large number of independent ordinary differential equation systems☆39Jan 25, 2021Updated 5 years ago
- Faster, more accurate and entirely open source method for predicting contacts in proteins☆12May 21, 2018Updated 8 years ago
- The Recent History Exchange Implemented in Elixir☆18Jun 3, 2013Updated 13 years ago
- ☆17Oct 29, 2021Updated 4 years ago
- Scraper of ResetEra threads and posts to get them into a format suitable for feeding them into GPT-2.☆15Jun 20, 2019Updated 7 years ago
- Leaflet.KSP is a Leaflet plugin for displaying celestial bodies from Kerbal Space Program.☆15Sep 9, 2014Updated 11 years ago
- R library for simulation of PKPD models [DEPRECATED, see InsightRX/PKPDsim]☆21Aug 16, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python application for finding apo and holo structures for user-defined protein-ligand interactions☆10Feb 7, 2023Updated 3 years ago
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆28Mar 13, 2023Updated 3 years ago
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆24Mar 9, 2026Updated 5 months ago
- Tools for encoding Magic: The Gathering cards into a form suitable for AI text generation☆19May 2, 2021Updated 5 years ago
- POC of building React UI for FreeCAD☆15Jan 5, 2023Updated 3 years ago
- Clotho☆11Jul 14, 2015Updated 11 years ago
- ARCHIVED--Docker app to crawl URLs and generate WARCs☆10Apr 11, 2017Updated 9 years ago
- Major mode for editing and executing AppleScript code☆13Mar 6, 2021Updated 5 years ago
- Docker image for GPGPU (OpenCL)☆12Mar 6, 2015Updated 11 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- https://towardsdatascience.com/instance-segmentation-web-app-63016b8ed4ae☆12Mar 3, 2021Updated 5 years ago
- ☆12Dec 2, 2024Updated last year
- ☆27Dec 9, 2022Updated 3 years ago
- research software encyclopedia database☆14Updated this week
- The MG-RAST pipeline☆25Nov 30, 2022Updated 3 years ago
- Examples + Visualizations of datasets modeled using automl-gs☆16Mar 26, 2019Updated 7 years ago
- RxODE is an R package that facilitates easy simulations in R☆21Mar 28, 2017Updated 9 years ago