This is a summer training course at CCIC (Faculty of Computers and Information), Mansoura University, Egypt.
☆22Apr 25, 2023Updated 3 years ago
Alternatives and similar repositories for Informatics-on-High-throughput-Sequencing-Data-Course-Summer-2020-
Users that are interested in Informatics-on-High-throughput-Sequencing-Data-Course-Summer-2020- are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆48Oct 14, 2021Updated 4 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- ☆47Oct 24, 2025Updated 7 months ago
- Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.☆12Jun 2, 2022Updated 3 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Courses, tutorials and books that facilitate bioinformatics.☆68Jan 2, 2024Updated 2 years ago
- CPANG19 - Computational PANGenomics (2019)☆12May 7, 2020Updated 6 years ago
- Pipeline to automatically analyse SARS-CoV-2 Whole genome sequencing Illumina data obtained using EasySeq SARS-CoV-2/COVID-19 Whole Geno…☆15Jul 26, 2022Updated 3 years ago
- Course material for OPEN & REPRODUCIBLE MICROBIOME DATA ANALYSIS SPRING SCHOOL☆29May 1, 2020Updated 6 years ago
- ☆13Sep 22, 2017Updated 8 years ago
- NGSeminar on the use of Jupyter and R notebooks in biomedical research☆13Jan 28, 2023Updated 3 years ago
- pipeline for the analysis of small RNA data☆14Jun 24, 2019Updated 6 years ago
- some short but practical PERL script in NGS data analysis☆16Oct 30, 2017Updated 8 years ago
- Generic human DNA variant annotation pipeline☆60Feb 13, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Workflow for viral analysis guided by reference☆18Apr 14, 2026Updated last month
- ☆57Feb 5, 2021Updated 5 years ago
- MIRA: Portable, Interactive Application for High-Quality Influenza, SARS-CoV-2 and RSV Genome Assembly, Annotation, and Curation☆23Apr 1, 2026Updated last month
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Dec 4, 2018Updated 7 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆66Updated this week
- This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computati…☆17Nov 7, 2021Updated 4 years ago
- Genomewide Epistasis Analysis on Bacteria☆15May 13, 2025Updated last year
- A Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.☆17Jul 9, 2024Updated last year
- Biolab's IPython's notebooks.☆16Oct 19, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Nov 28, 2022Updated 3 years ago
- Code to reproduce results on toy tasks and companion blog for the paper.☆22Jun 8, 2022Updated 3 years ago
- ☆12Oct 11, 2024Updated last year
- Python simulation of the quantum key distribution protocol using QuTip simulator.☆19May 31, 2021Updated 4 years ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆26Feb 13, 2025Updated last year
- A nextflow pipeline for calling exome CNVs☆14May 20, 2026Updated last week
- docking visualization with py3dmol and streamlit☆25Mar 15, 2021Updated 5 years ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Jan 15, 2024Updated 2 years ago
- A pipeline for the identification of Compound Heterozygous Variants☆10Nov 10, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A project for implementing ML and NLP papers☆13May 22, 2020Updated 6 years ago
- Analysis of Cancer Genomes; 2017 edition☆16Jan 21, 2018Updated 8 years ago
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 4 years ago
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- 🌈 Python cheatsheet for all standard libraries