int-brain-lab / ibl-neuropixelLinks
Collection of tools to handle Neuropixel 1.0 and 2.0 data
☆17Updated this week
Alternatives and similar repositories for ibl-neuropixel
Users that are interested in ibl-neuropixel are comparing it to the libraries listed below
Sorting:
- ☆27Updated 2 weeks ago
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆62Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆41Updated 8 months ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- IBL core shared libraries☆65Updated this week
- Metrics for spike sorting validation/quality control☆15Updated 4 years ago
- pyqt5 dependent applications for IBL sessions☆31Updated 2 months ago
- Collection of probe description for probeinterface☆17Updated 3 weeks ago
- Browser-based NWB visualization and DANDI exploration☆62Updated 2 weeks ago
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 6 months ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆12Updated last year
- Open Neurophysiology Environment☆21Updated 3 weeks ago
- ☆52Updated last year
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last week
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- Python package to handle probe layout, geometry and wiring to device.☆75Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 5 months ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last month
- Web app for viewing results of ephys spike sorting☆27Updated 3 months ago
- Histology processing☆71Updated 2 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆72Updated last month
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 6 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 4 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 2 months ago