int-brain-lab / ibl-neuropixelLinks
Collection of tools to handle Neuropixel 1.0 and 2.0 data
☆17Updated this week
Alternatives and similar repositories for ibl-neuropixel
Users that are interested in ibl-neuropixel are comparing it to the libraries listed below
Sorting:
- ☆22Updated last week
- Spike Sorting Utilities☆9Updated 2 years ago
- WIP: Python port of Kilosort2☆51Updated 2 years ago
- Browser-based NWB visualization and DANDI exploration☆59Updated 2 weeks ago
- IBL core shared libraries☆63Updated 2 weeks ago
- Collection of probe description for probeinterface☆16Updated last week
- Histology processing☆66Updated last month
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆25Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆61Updated this week
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 4 months ago
- Metrics for spike sorting validation/quality control☆13Updated 3 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆55Updated this week
- Functions to assess quality of spike sorting results☆34Updated last year
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆21Updated last week
- Mesoscale activity ephys ingest schema☆11Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆126Updated 2 weeks ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆26Updated 2 weeks ago
- pyqt5 dependent applications for IBL sessions☆28Updated last week
- ☆22Updated 8 months ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆12Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆67Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆74Updated 3 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆103Updated 7 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 5 months ago
- Plugins for Phy2☆15Updated 2 months ago
- Web app for viewing results of ephys spike sorting☆26Updated 4 months ago
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated last year