int-brain-lab / ibl-neuropixel
Collection of tools to handle Neuropixel 1.0 and 2.0 data
☆13Updated this week
Alternatives and similar repositories for ibl-neuropixel:
Users that are interested in ibl-neuropixel are comparing it to the libraries listed below
- ☆21Updated this week
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆16Updated last month
- Match suite2p ROIs between imaging sessions☆23Updated 5 years ago
- pyqt5 dependent applications for IBL sessions☆25Updated last month
- Metrics for spike sorting validation/quality control☆12Updated 3 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆45Updated last year
- Web app for viewing results of ephys spike sorting☆25Updated last month
- Browser-based NWB visualization and DANDI exploration☆50Updated 3 weeks ago
- WIP: Python port of Kilosort2☆50Updated last year
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated 7 months ago
- Spike Sorting Utilities☆9Updated 2 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆53Updated this week
- Mesoscale activity ephys ingest schema☆11Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆48Updated last week
- A tool to streamline extracellular electrophysiology analysis using SpikeInterface☆13Updated this week
- Python package to handle probe layout, geometry and wiring to device.☆55Updated this week
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆11Updated 11 months ago
- Histology processing☆64Updated 9 months ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- Lightweight electrophysiological data analysis library☆13Updated 7 months ago
- Stream data from PrairieView into MATLAB to allow online processing and analysis☆11Updated last year
- Plugins for Phy2☆15Updated this week
- Neuropixels case for chronic recordings in freely moving mice.☆16Updated 5 years ago
- Functions to assess quality of spike sorting results☆32Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆33Updated this week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆45Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- JRCLUST☆34Updated 8 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 3 months ago