int-brain-lab / ibl-neuropixelLinks
Collection of tools to handle Neuropixel 1.0 and 2.0 data
☆17Updated last month
Alternatives and similar repositories for ibl-neuropixel
Users that are interested in ibl-neuropixel are comparing it to the libraries listed below
Sorting:
- ☆23Updated last week
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆28Updated 2 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆63Updated this week
- Collection of probe description for probeinterface☆16Updated 2 months ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 5 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 6 months ago
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆12Updated last year
- Browser-based NWB visualization and DANDI exploration☆59Updated this week
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Histology processing☆69Updated this week
- IBL core shared libraries☆63Updated this week
- Open Neurophysiology Environment☆21Updated this week
- Plugins for Phy2☆16Updated 4 months ago
- ☆52Updated last year
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- pyqt5 dependent applications for IBL sessions☆29Updated 3 weeks ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆26Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆131Updated 2 months ago
- Python package to handle probe layout, geometry and wiring to device.☆72Updated 2 weeks ago
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆23Updated last week
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆38Updated last month
- Metrics for spike sorting validation/quality control☆14Updated 4 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 5 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 4 months ago