Alternatives and similar repositories for RoseTTAFold

Users that are interested in RoseTTAFold are comparing it to the libraries listed below

• aqlaboratory / openfold
  Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
  ☆3,017Updated last month
• lucidrains / alphafold2
  To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
  ☆1,604Updated 2 years ago
• sokrypton / ColabFold
  Making Protein folding accessible to all!
  ☆2,246Updated 2 weeks ago
• google-deepmind / alphafold
  Open source code for AlphaFold 2.
  ☆13,552Updated 2 months ago
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,284Updated 9 months ago
• facebookresearch / esm
  Evolutionary Scale Modeling (esm): Pretrained language models for proteins
  ☆3,623Updated last year
• RosettaCommons / RFdiffusion
  Code for running RFdiffusion
  ☆2,206Updated last month
• HeliXonProtein / OmegaFold
  OmegaFold Release Code
  ☆585Updated 2 years ago
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,252Updated last month
• Peldom / papers_for_protein_design_using_DL
  List of papers about Proteins Design using Deep Learning
  ☆1,678Updated last week
• agemagician / ProtTrans
  ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…
  ☆1,207Updated last week
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆707Updated last month
• yangkky / Machine-learning-for-proteins
  Listing of papers about machine learning for proteins.
  ☆1,619Updated last year
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆569Updated 9 months ago
• kyegomez / AlphaFold3
  Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
  ☆783Updated last week
• kalininalab / alphafold_non_docker
  AlphaFold2 non-docker setup
  ☆357Updated last year
• baker-laboratory / RoseTTAFold-All-Atom
  ☆719Updated this week
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆982Updated 2 weeks ago
• Urinx / alphafold_pytorch
  An implementation of the DeepMind's AlphaFold based on PyTorch for research
  ☆395Updated 4 years ago
• salesforce / progen
  Official release of the ProGen models
  ☆651Updated last year
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆730Updated 3 weeks ago
• biotite-dev / biotite
  A comprehensive library for computational molecular biology
  ☆809Updated last week
• a-r-j / graphein
  Protein Graph Library
  ☆1,101Updated 2 months ago
• dellacortelab / prospr
  ProSPr: Protein Structure Prediction
  ☆420Updated 2 years ago
• songlab-cal / tape
  Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…
  ☆696Updated 2 years ago
• nadavbra / protein_bert
  ☆531Updated last month
• soedinglab / MMseqs2
  MMseqs2: ultra fast and sensitive search and clustering suite
  ☆1,665Updated 2 weeks ago
• microsoft / evodiff
  Generation of protein sequences and evolutionary alignments via discrete diffusion models
  ☆601Updated this week
• ccsb-scripps / AutoDock-Vina
  AutoDock Vina
  ☆738Updated 2 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆360Updated 11 months ago