Alternatives and similar repositories for pymol-open-source

Users that are interested in pymol-open-source are comparing it to the libraries listed below

• ccsb-scripps / AutoDock-Vina
  AutoDock Vina
  ☆833Updated 3 weeks ago
• openbabel / openbabel
  Open Babel is a chemical toolbox designed to speak the many languages of chemical data.
  ☆1,236Updated 7 months ago
• sokrypton / ColabFold
  Making Protein folding accessible to all!
  ☆2,485Updated last week
• ccsb-scripps / AutoDock-GPU
  AutoDock for GPUs and other accelerators
  ☆528Updated last month
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆496Updated 2 months ago
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆771Updated 4 months ago
• gnina / gnina
  A deep learning framework for molecular docking
  ☆788Updated 2 months ago
• biotite-dev / biotite
  A comprehensive library for computational molecular biology
  ☆881Updated last week
• nglviewer / nglview
  Jupyter widget to interactively view molecular structures and trajectories
  ☆895Updated last month
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆624Updated last year
• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake,…
  ☆599Updated last week
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆1,087Updated this week
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,497Updated last year
• volkamerlab / teachopencadd
  TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
  ☆922Updated this week
• prody / ProDy
  A Python Package for Protein Dynamics Analysis
  ☆506Updated last week
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,352Updated 6 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆878Updated 2 months ago
• baker-laboratory / RoseTTAFold-All-Atom
  ☆758Updated 5 months ago
• molstar / molstar
  A comprehensive macromolecular library
  ☆840Updated last week
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆832Updated last week
• openmm / pdbfixer
  PDBFixer fixes problems in PDB files
  ☆597Updated this week
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆695Updated last year
• generatebio / chroma
  A generative model for programmable protein design
  ☆771Updated last year
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆452Updated this week
• PatWalters / practical_cheminformatics_tutorials
  Practical Cheminformatics Tutorials
  ☆1,105Updated last week
• gromacs / gromacs
  Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/…
  ☆832Updated last week
• soedinglab / MMseqs2
  MMseqs2: ultra fast and sensitive search and clustering suite
  ☆1,862Updated last week
• kalininalab / alphafold_non_docker
  AlphaFold2 non-docker setup
  ☆367Updated last year
• MDAnalysis / mdanalysis
  MDAnalysis is a Python library to analyze molecular dynamics simulations.
  ☆1,480Updated this week
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆334Updated this week