google-deepmind / alphafold
Open source code for AlphaFold 2.
☆13,158Updated last week
Alternatives and similar repositories for alphafold:
Users that are interested in alphafold are comparing it to the libraries listed below
- This package contains deep learning models and related scripts for RoseTTAFold☆2,080Updated 11 months ago
- To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released☆1,591Updated 2 years ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆2,890Updated 2 months ago
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆3,411Updated last year
- Making Protein folding accessible to all!☆2,086Updated 3 weeks ago
- Code for running RFdiffusion☆1,951Updated 5 months ago
- This repository contains implementations and illustrative code to accompany DeepMind publications☆13,468Updated 2 months ago
- Implementation of Alphafold 3 from Google Deepmind in Pytorch☆1,352Updated 2 weeks ago
- Listing of papers about machine learning for proteins.☆1,575Updated 8 months ago
- Code for the ProteinMPNN paper☆1,146Updated 5 months ago
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,173Updated 2 weeks ago
- Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more☆31,215Updated this week
- An implementation of the DeepMind's AlphaFold based on PyTorch for research☆393Updated 4 years ago
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,166Updated 5 months ago
- Flax is a neural network library for JAX that is designed for flexibility.☆6,317Updated this week
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆774Updated this week
- Trax — Deep Learning with Clear Code and Speed☆8,159Updated this week
- List of papers about Proteins Design using Deep Learning☆1,546Updated this week
- AlphaFold 3 inference pipeline.☆5,996Updated this week
- JAX-based neural network library☆2,957Updated last week
- Standardized data set for machine learning of protein structure☆882Updated 4 years ago
- Open source implementation of AlphaFold3☆959Updated 4 months ago
- Open-source foundation of the user-sponsored PyMOL molecular visualization system.☆1,274Updated this week
- A powerful and flexible machine learning platform for drug discovery☆1,470Updated 6 months ago
- Flexible and powerful tensor operations for readable and reliable code (for pytorch, jax, TF and others)☆8,713Updated this week
- A tiny scalar-valued autograd engine and a neural net library on top of it with PyTorch-like API☆11,113Updated 6 months ago
- ColabFold on your local PC☆643Updated 2 weeks ago
- ☆2,714Updated 9 months ago
- MMseqs2: ultra fast and sensitive search and clustering suite☆1,528Updated 2 weeks ago
- Monte Carlo tree search in JAX☆2,421Updated 2 months ago