mapping-commons / mh_mapping_initiative
Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.
☆13Updated 7 months ago
Related projects ⓘ
Alternatives and complementary repositories for mh_mapping_initiative
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated 8 months ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆20Updated 2 weeks ago
- ☆11Updated this week
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆50Updated 2 weeks ago
- Github repo for the Experimental Factor Ontology (EFO)☆57Updated this week
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆76Updated 3 weeks ago
- Build for NCBITaxon☆27Updated this week
- ☆26Updated 5 years ago
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆13Updated 3 months ago
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆15Updated this week
- Ontology Based Profile Matching☆17Updated 2 years ago
- source files for OBA (Ontology of Biological Attributes)☆27Updated this week
- Communitiy-based Cell Line Ontology☆18Updated 5 months ago
- PATO - the Phenotype And Trait Ontology☆58Updated last week
- ☆23Updated 3 years ago
- OBO Library edition of NCIt☆22Updated 6 months ago
- Repository for the GA4GH phenopacket schema☆79Updated 2 months ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated 4 months ago
- Python Phenopacket Tools☆11Updated 3 weeks ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆13Updated last year
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆47Updated this week
- Data Ingestion Pipeline for Monarch☆57Updated 2 years ago
- National Microbiome Data Collaborative (NMDC) unified data model☆27Updated this week
- Medical action ontology☆52Updated 2 months ago
- ☆14Updated last month
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆61Updated this week
- Explore the Plant Trait Ontology on the Planteome site.☆39Updated 3 weeks ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆13Updated 2 weeks ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆33Updated this week
- Data ingest application for Monarch Initiative knowledge graph using Koza☆15Updated this week