gdocking / gdockLinks
Protein-Protein Docking using Genetic Algorithm
☆17Updated last year
Alternatives and similar repositories for gdock
Users that are interested in gdock are comparing it to the libraries listed below
Sorting:
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆28Updated last year
- ☆26Updated last month
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆30Updated last week
- Some scripts that I keep using over and over.☆18Updated 5 months ago
- Python code to automatically interact with PDBePISA web server☆10Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Updated 2 years ago
- PyDock Tutorial☆32Updated 6 years ago
- ☆13Updated 7 years ago
- MEGADOCK on Google Colaboratory☆17Updated last year
- ☆15Updated 2 years ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 2 weeks ago
- Perform probe-guided blind docking with FTMap and DOCK6☆10Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆17Updated last year
- ZDOCK predictions and PDB structures in C++ and Python☆13Updated last year
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆7Updated last year
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆10Updated 4 years ago
- ☆14Updated 3 months ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 4 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 11 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- dMaSIF implementation for google colab☆32Updated 2 years ago
- Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term☆27Updated 6 months ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last week
- protein docking using a density-based descriptor for atoms charge and dynamics☆14Updated 2 years ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 4 months ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated last year