Dashboard for the Inference and Analysis of Networks from Expression data
☆16Jan 8, 2024Updated 2 years ago
Alternatives and similar repositories for DIANE
Users that are interested in DIANE are comparing it to the libraries listed below
Sorting:
- See https://biometris.github.io/statgenGWAS for a full description☆15Feb 20, 2026Updated last month
- MUMmer for HPC☆17Jan 7, 2013Updated 13 years ago
- Enabling differential allele-specific analysis☆11Dec 28, 2024Updated last year
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- ☆13Mar 10, 2026Updated last week
- Imputation of single cell RNA-sequencing data with autoencoder☆16Jun 23, 2021Updated 4 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Aug 22, 2017Updated 8 years ago
- Tools for working with Variant Call Format files.☆12Jan 22, 2026Updated last month
- a bioinformatics tool for simulating single-cell genome sequencing data☆10Dec 19, 2019Updated 6 years ago
- Needleman-Wunsch Algorithm for global alignment and local alignment☆12Feb 12, 2020Updated 6 years ago
- Preprocessing sequencing data for allele-specific analysis☆12Mar 11, 2025Updated last year
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆12May 22, 2025Updated 9 months ago
- Download binary executables and sample data here:☆18Oct 28, 2016Updated 9 years ago
- ☆10Dec 10, 2021Updated 4 years ago
- Efficient handling of FASTQ files from Python☆51Nov 28, 2025Updated 3 months ago
- ☆19Mar 11, 2024Updated 2 years ago
- Creation of a Web application using R and Shiny for prediction of Heart Disease using Machine Learning☆16Jun 15, 2018Updated 7 years ago
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- ☆19Mar 8, 2023Updated 3 years ago
- Enhancements and Utilities for the gt Package☆20Sep 15, 2024Updated last year
- ☆18May 15, 2025Updated 10 months ago
- A nodejs implementation of AI Explained on youtube's SmartGPT prompting strategy for getting better responses from gpt4.☆16May 9, 2023Updated 2 years ago
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated last year
- CellCoal: coalescent simulation of single-cell NGS genotypes☆15Feb 10, 2025Updated last year
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Jun 28, 2024Updated last year
- How to use Fast.ai from R - eRum 2020 presentation code☆20Jul 27, 2021Updated 4 years ago
- Deleterious mutation prediction pipeline☆13Dec 16, 2024Updated last year
- FMtree: A fast locating algorithm of FM-indexes for genomic data☆18Sep 27, 2017Updated 8 years ago
- Course Materials for Genomics Data Mining☆22Sep 18, 2025Updated 6 months ago
- Discovery of biological sequence motifs in R☆29Dec 20, 2018Updated 7 years ago
- vIPer: a new tool for IPython notebooks.☆60Jan 7, 2015Updated 11 years ago
- ☆12Jan 29, 2025Updated last year
- An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps☆21Apr 3, 2018Updated 7 years ago
- RAPToR (Real Age Prediction from Transcriptome staging on Reference) is a tool to accurately predict individual samples' developmental ag…☆23Mar 29, 2023Updated 2 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- ☆21Jul 25, 2023Updated 2 years ago
- ☆13Jan 21, 2026Updated last month
- Machine learning workshop materials☆15Nov 19, 2024Updated last year
- Find CNVs in single cell sequencing data.☆18Apr 4, 2023Updated 2 years ago