RNASeq-Pipeline for Quantification and Enrichment Analysis
☆12May 30, 2024Updated 2 years ago
Alternatives and similar repositories for RNASeq-Pipeline
Users that are interested in RNASeq-Pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Dec 22, 2025Updated 5 months ago
- Personalized Network-based Anti-Cancer Therapy Appointment☆11Dec 22, 2025Updated 5 months ago
- KNN, KMeans, Decision Tree, Naive Bayesian, Linear Regression, Principal Component Analysis, Neural Networks, Support Vector Machines al…☆12Jun 30, 2020Updated 5 years ago
- GDmicro - Use GCN and Deep adaptation network to classify host disease status based on human gut microbiome data.☆11Mar 22, 2024Updated 2 years ago
- GenePiper☆12Mar 13, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package for single-cell comparative regulatory analysis☆10Jun 26, 2021Updated 4 years ago
- scRNA-seq analysis beyond gene annotations using transcriptionally active regions (TARs) generated from sequence alignment data☆11Jul 25, 2022Updated 3 years ago
- Project Manager for NGS data analysis☆31May 19, 2026Updated last week
- [CRAN-Submission-Ready] All your shinylive apps are belong to us☆14Aug 18, 2025Updated 9 months ago
- A complete waste of time☆15Dec 11, 2022Updated 3 years ago
- An R Package for Discovering Rhythmicity in Biological Data with an Interactive Web Interface☆13Mar 7, 2022Updated 4 years ago
- Explore the cancer relevance of your gene list☆54Dec 17, 2025Updated 5 months ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Demo repository for creating a Quarto workflow with {quarto-webr} and {quarto-pyodide}☆18Jun 27, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- A mapper for 10x-flex single cell sequencing reads with fixed abstract geometries☆45May 22, 2026Updated last week
- Cross-attention-based cell-cell interaction inference from ST data.☆21Apr 2, 2026Updated last month
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- Differential RhythmicitY analysis in R is an R package that provides the statistical framework to assess differential rhythmicity of a ti…☆20Feb 2, 2026Updated 3 months ago
- In-depth analysis of normalization and transformation methods for building coexpression networks from RNA-seq data.☆15Aug 4, 2023Updated 2 years ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆16Oct 10, 2019Updated 6 years ago
- Nascent Transcription Processing Pipeline☆22Apr 30, 2026Updated last month
- Quarto revealjs slides to teach introductory statistics concepts using webR.☆25Jul 2, 2024Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆21Jul 16, 2020Updated 5 years ago
- VMD Audio/Text control with natural language☆19May 12, 2021Updated 5 years ago
- R package for generating beautiful and customizable plots for the exons and introns of any gene☆12Jul 26, 2021Updated 4 years ago
- "Archaeogenetics analysis of Anatolia"☆14Jan 27, 2021Updated 5 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆17Dec 28, 2022Updated 3 years ago
- A Python package for obtaining, parsing and exploring biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)☆51May 5, 2026Updated 3 weeks ago
- ☆12Mar 1, 2025Updated last year
- Tissue reassembly with generative AI☆31May 22, 2025Updated last year
- Intro to Shell for Bioinformatics - with STG examples☆28Jul 12, 2016Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- pathway based data integration and visualization☆48Mar 28, 2025Updated last year
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆200Dec 22, 2025Updated 5 months ago
- ☆79Jul 12, 2023Updated 2 years ago
- Error & warning handling for R inspired by go☆22Jan 28, 2024Updated 2 years ago
- ☆43Feb 12, 2026Updated 3 months ago
- VMD plugin to calculate and visualize clusters of conformations for a trajectory☆23Oct 24, 2018Updated 7 years ago
- ShinyCell2 is a lightweight R package for building interactive, shareable apps to explore single-cell multi-omics, scATAC-seq and spatial…☆57Jun 1, 2025Updated 11 months ago