☆22Feb 25, 2025Updated last year
Alternatives and similar repositories for AF2_benchmark
Users that are interested in AF2_benchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Sep 17, 2024Updated 2 years ago
- Converts AlphaFold distograms into distance matrices and saves them into a number of formats☆16Dec 13, 2022Updated 3 years ago
- Cryptic pocket prediction using AlphaFold 2☆25Nov 27, 2022Updated 3 years ago
- A Python package to generate free energy landscape (FEL) of molecular dynamics (MD) trajectory obtained from GROMACS. It also extracts th…☆15Apr 4, 2025Updated last year
- ☆12May 3, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Aug 8, 2025Updated last year
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Aug 21, 2026Updated 3 weeks ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆56Dec 27, 2023Updated 2 years ago
- ☆53Aug 19, 2024Updated 2 years ago
- ☆17Jan 5, 2024Updated 2 years ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆191Oct 7, 2025Updated 11 months ago
- Benchmarking deep learning models generating molecules in 3D☆20Apr 12, 2025Updated last year
- A python script for PyMol to make protein-ligand interaction images.☆19Apr 1, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Deep ResNet-based protein contact prediction☆19Mar 30, 2020Updated 6 years ago
- ☆19Aug 18, 2026Updated last month
- ☆22May 7, 2024Updated 2 years ago
- Disordered protein ensemble prediction☆16Aug 31, 2026Updated 2 weeks ago
- Generates images from mmCIF/BCIF files☆46Sep 3, 2026Updated 2 weeks ago
- design pipeline for protein, nucleic acid, and small molecule☆46Mar 5, 2026Updated 6 months ago
- ☆23Sep 19, 2025Updated last year
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆32Jul 25, 2022Updated 4 years ago
- ☆16Oct 27, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Versatile Molecular Editing via Multimodal and Group-optimized Generative Learning☆26May 22, 2025Updated last year
- ColabFold protocol☆62Oct 17, 2024Updated last year
- ☆24Aug 13, 2026Updated last month
- Get access to our MD data files.☆34Nov 22, 2023Updated 2 years ago
- Reinforcement learning based cyclic peptide binder design☆20Jul 22, 2025Updated last year
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 7 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 7 years ago
- NLM Medical Text Indexer (MTI)☆10May 18, 2022Updated 4 years ago
- Service discovery for Finagle cluster with Consul.☆10Sep 27, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Code for ApoDock☆21Apr 7, 2025Updated last year
- ☆27Feb 16, 2022Updated 4 years ago
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆24Oct 31, 2025Updated 10 months ago
- ☆35Jun 29, 2024Updated 2 years ago
- 『Pythonで動かしてはじめる量子化学計算』(コロナ社,2024)☆25Jun 5, 2024Updated 2 years ago
- Documentation for NCBI BLAST AMI☆11Feb 28, 2022Updated 4 years ago
- Generate intrinsically disordered peptide conformations via machine learning☆26May 26, 2024Updated 2 years ago