MaayanLab / Knowledge-Graph-UILinks
Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries. Example implementati…
☆17Updated last week
Alternatives and similar repositories for Knowledge-Graph-UI
Users that are interested in Knowledge-Graph-UI are comparing it to the libraries listed below
Sorting:
- An automated workflow to create disease-specific Knowledge Graphs☆18Updated 3 months ago
- The advanced implementation for BioChatter, using Next.js☆15Updated 10 months ago
- The light frontend for BioChatter, in pure Python☆54Updated 4 months ago
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆22Updated 5 months ago
- A stitching platform for InXight☆15Updated 8 months ago
- jinja2-enabled jupyter notebooks☆37Updated this week
- K-RET: Knowledgeable Biomedical Relation Extraction System☆10Updated 9 months ago
- Template for creating a BioCypher-driven knowledge graph☆12Updated last month
- 🔍 Enable AI assistants to search and access bioRxiv papers through a simple MCP interface.☆20Updated 8 months ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆31Updated 8 months ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 4 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆85Updated 5 months ago
- ☆18Updated last year
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆42Updated this week
- ☆31Updated 6 months ago
- BioThings API framework - Making high-performance API for biological annotation data☆48Updated 3 weeks ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆33Updated 8 years ago
- ☆18Updated 6 years ago
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆16Updated last week
- Visualization and analysis platform for metabolic data and network pattern recognition☆40Updated 8 months ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated 2 weeks ago
- Example usage of the Benchling API: https://docs.benchling.com/☆35Updated 6 months ago
- Benchmark for LLM-based Agents in Computational Biology☆65Updated 2 months ago
- The Agentic BioML Challenge + AutoBioML framework☆18Updated 6 months ago
- Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on …☆79Updated 2 years ago
- code for Gogleva et al manuscript☆46Updated 3 years ago
- Analysis on stop reasons☆10Updated last year
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆16Updated 5 months ago
- ☆26Updated 4 years ago
- GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data☆33Updated 5 months ago