Alternatives and similar repositories for biothings_explorer_archived

Users that are interested in biothings_explorer_archived are comparing it to the libraries listed below

• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 9 months ago
• biocommons / eutils
  simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
  ☆61Updated 11 months ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆47Updated this week
• ohsu-comp-bio / g2p-aggregator
  Associations of genomic features, drugs and diseases
  ☆48Updated 2 years ago
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated 6 months ago
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆14Updated 4 months ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 10 months ago
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 3 years ago
• Rothamsted / knetminer
  KnetMiner - webapp to search and visualize genome-scale knowledge graphs
  ☆28Updated 3 weeks ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• jakelever / pubrunner
  A framework for keeping biomedical text mining result up-to-date
  ☆42Updated 4 years ago
• WGLab / EHR-Phenolyzer
  A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list
  ☆37Updated last year
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆35Updated this week
• MachineLearning-ELIXIR / dome-ml
  ☆20Updated 4 years ago
• Novartis / railroadtracks
  Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.
  ☆14Updated 9 years ago
• intermine / intermine-ws-python-docs
  Tutorials for the InterMine Python web client
  ☆14Updated 3 years ago
• gawbul / pyEnsemblRest
  A client for the Ensembl REST API written in the Python programming language
  ☆27Updated 6 months ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• microbiomedata / nmdc-metadata
  Managing metadata and policy around metadata in NMDC
  ☆2Updated last year
• basespace / basespace-python-sdk
  BaseSpace Python SDK
  ☆37Updated 3 years ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆56Updated this week
• IEDB / ONTIE
  Ontology for Immune Epitopes
  ☆13Updated 4 months ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• elixir-europe / biohackathon-projects-2024
  Project code for BioHackathon Europe 2024.
  ☆22Updated 6 months ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• pamelarussell / github-bioinformatics
  Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
  ☆31Updated 6 years ago
• mapping-commons / mh_mapping_initiative
  Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.
  ☆13Updated 2 weeks ago
• EBISPOT / EFO-UKB-mappings
  ☆15Updated 6 years ago