MDAnalysis / strideLinks
STRIDE: Protein secondary structure assignment from atomic coordinates
☆15Updated 3 years ago
Alternatives and similar repositories for stride
Users that are interested in stride are comparing it to the libraries listed below
Sorting:
- PyDock Tutorial☆35Updated 7 years ago
- The DSSP building software☆50Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 7 months ago
- ☆23Updated 4 years ago
- ☆56Updated 5 months ago
- An open-source library for the analysis of protein interactions.☆33Updated 4 years ago
- Set of useful HADDOCK utility scripts☆57Updated 4 months ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Updated 3 years ago
- ☆36Updated 4 years ago
- PyPEF – Pythonic Protein Engineering Framework☆25Updated 4 months ago
- This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the Universit…☆91Updated last week
- ☆43Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆23Updated 9 years ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆19Updated 4 years ago
- RosettaDesign using PyRosetta☆33Updated 6 years ago
- An accurate and efficient protein sequence design approach☆27Updated 10 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46Updated 8 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆62Updated 5 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆63Updated 10 months ago
- Protein Structure Analysis☆63Updated 4 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆19Updated 6 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆66Updated last month
- Real-time structure motif searching in protein 3D structures using an inverted index strategy☆14Updated 6 months ago
- Python package to manage protein structures and their annotations☆45Updated last year
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Updated 4 years ago
- AlphaFold-initiated replica exchange protein docking☆87Updated 8 months ago
- Direct coupling analysis software for protein and RNA sequences☆58Updated 6 months ago