STRIDE: Protein secondary structure assignment from atomic coordinates
☆16Apr 25, 2022Updated 4 years ago
Alternatives and similar repositories for stride
Users that are interested in stride are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Binding Affinity Prediction using Deep learning models☆12Jun 9, 2021Updated 5 years ago
- Repository for Ruff, King et al. Molecular grammars of predicted intrinsically disordered regions that span the human proteome☆19Dec 29, 2025Updated 8 months ago
- Sparse matrix linear equation solver, using the Conjugate Gradient algorithm☆16Sep 5, 2020Updated 5 years ago
- ☆17Dec 13, 2020Updated 5 years ago
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆20Dec 30, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python interface for the RCSB search API.☆20Mar 20, 2024Updated 2 years ago
- ☆12May 16, 2020Updated 6 years ago
- A classroom exercise using HGDP SNP data to introduce population structure concepts☆14Jul 27, 2021Updated 5 years ago
- JavaScript library to build canvas roguelikes☆12Sep 11, 2015Updated 10 years ago
- The bioplib library☆12Jul 25, 2023Updated 3 years ago
- MIFit is a cross-platform interactive graphics application for molecular modeling, fitting, and refinement of protein structures from x-r…☆11Jun 12, 2017Updated 9 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 6 years ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- ☆14Aug 22, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆51Sep 25, 2024Updated last year
- Clusters protein chains based on CA distance difference☆19Jul 22, 2026Updated last month
- An efficient protein structural alignment search algorithm☆17Sep 17, 2025Updated 11 months ago
- 基于Opengl的3d引擎,C做的底层接口,Lua封装的组件☆12May 24, 2020Updated 6 years ago
- A self-hosted, keyboard-driven cockpit for running a whole fleet of Claude Code agents at once. Worktrees, command palette, scheduler, vo…☆20Aug 15, 2026Updated 2 weeks ago
- Cryo-EM/ET image analysis☆14Mar 30, 2026Updated 5 months ago
- Code companion for the technical book Teaching Computers to Read☆15Jan 14, 2026Updated 7 months ago
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29May 23, 2018Updated 8 years ago
- A software package to identify and locate knots in polymers☆14Nov 20, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆186Updated this week
- A 3D-equivariant neural network for protein structure accuracy estimation☆22Feb 24, 2023Updated 3 years ago
- An interactive visualization of the Hopf fibration☆15Dec 6, 2022Updated 3 years ago
- Functional TensorFlow Implementation of Singular Value Decomposition for paper Fast Graph Learning☆13Feb 23, 2021Updated 5 years ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆18Jan 14, 2025Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆134Jul 23, 2024Updated 2 years ago
- Numerical experiments with stochastic differential equations☆21Dec 21, 2018Updated 7 years ago
- A repository for converting images to feature embeddings, for the purpose of assessing image similarity☆20Mar 17, 2023Updated 3 years ago
- A Matlab script for deconvolving the CTF in single micrographs/tomograms with a Wiener-like filter☆12Jun 26, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Mar 23, 2023Updated 3 years ago
- ☆13Jun 18, 2018Updated 8 years ago
- A script that computationally designs a vaccine☆18Jan 9, 2022Updated 4 years ago
- LeetCode刷题记录,无毒神掌小助手☆15Jul 12, 2025Updated last year
- Solvent Accessible Surface Areas of Biomolecules and their Complexes☆19Jul 26, 2026Updated last month
- ☆15Sep 14, 2021Updated 4 years ago
- Cadabra computer algebra☆21Dec 20, 2016Updated 9 years ago