☆14Apr 25, 2026Updated 6 months ago
Alternatives and similar repositories for FetchM
Users that are interested in FetchM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Jun 5, 2026Updated 5 months ago
- ☆11Nov 30, 2025Updated 11 months ago
- Python3 wrapper for parallelized gene prediction using Prodigal☆11Mar 3, 2023Updated 3 years ago
- Taxon Set Enrichment Analysis☆12Oct 26, 2026Updated 2 weeks ago
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆39Aug 28, 2026Updated 2 months ago
- gemsparcl 💎✨ Rapid and consistent clustering of millions of genomes highlights the diversity of prokaryotic life☆20Jun 16, 2026Updated 4 months ago
- Phage-Host Interaction Search Tool☆33Sep 10, 2026Updated 2 months ago
- OxyMetaG: Oxygen metabolism profiling from metagenomic data☆15Aug 8, 2026Updated 3 months ago
- Embedding-based indexing for compact storage and rapid querying of bacterial pan-genomes☆25Sep 27, 2026Updated last month
- General procedure for making QIIME 2 compatible SILVA reference files☆20Oct 3, 2024Updated 2 years ago
- Query sequence database by HMMs arranged in predefined synteny structure☆21Jun 23, 2026Updated 4 months ago
- Simple-to-use interactive comparison of two bacterial genomes☆28Jan 30, 2026Updated 9 months ago
- Cython bindings and Python interface to Infernal 1.1.☆13Mar 31, 2026Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- 🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs☆67Aug 28, 2026Updated 2 months ago
- Python module to manipulate and visualize minimap2's cs tag☆11Sep 3, 2026Updated 2 months ago
- scripts for microbiome analysis☆12Jul 25, 2024Updated 2 years ago
- NCBI Taxonomy History Browser☆10May 7, 2026Updated 6 months ago
- Mapping-Assisted Targeted-Assembly for Metagenomics☆27Mar 28, 2025Updated last year
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆14Aug 5, 2026Updated 3 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆35Feb 27, 2024Updated 2 years ago
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated 2 years ago
- Official repository of the data-driven deconvolution approach Sweetwater.☆16Sep 9, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Command-line tool for visualizing batches of prokaryotic genomes☆11Jul 12, 2025Updated last year
- ☆11Apr 2, 2025Updated last year
- Fast, memory-efficient, and scalable taxonomic and pathway profiling for (pan)genome-resolved metagenomics and metatranscriptomics☆30Oct 26, 2026Updated 2 weeks ago
- kmer-based software for detecting bacterial strain genomes inside metagenomes☆12Dec 11, 2024Updated last year
- ☆12Mar 29, 2025Updated last year
- Protein structure search based on embeddings☆13Oct 25, 2026Updated 2 weeks ago
- ☆10Jan 8, 2024Updated 2 years ago
- Pan-genome Analysis☆14May 4, 2025Updated last year
- Calculates both scaffold and contig statistics (N50, L50, etc.) from a scaffold FASTA file.☆15Sep 29, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- LinearDisplay.pl is a program that generates publication quality linear maps of user-defined genetic features (e.g., ORFs, promoters, tra…☆10Apr 2, 2025Updated last year
- Metax: Accurate Cross-Domain Taxon Profiling via a Probabilistic Model of Genome Coverage☆40Nov 7, 2026Updated last week
- Workflow for MAG quality assessment and taxonomical annotation.☆15May 26, 2026Updated 5 months ago
- Fragment End Integrated Analysis tool☆10Apr 23, 2024Updated 2 years ago
- (a) (p)erfect (c)ircle? ... tests DNA sequences for overlapping ends, then trims and rejoins, and aligns reads to test the join☆11Apr 29, 2021Updated 5 years ago
- Scripts to generate and analyze afdb clusters☆12Sep 15, 2023Updated 3 years ago
- Protein function prediction based on alphaFold models☆10May 5, 2024Updated 2 years ago
Are these results useful?