Lindseynicer / WGCNA_tutorial
A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
☆56Updated 2 years ago
Related projects: ⓘ
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆65Updated last year
- An elegant package to visualize gene structures☆69Updated last year
- A pipeline to process m6A-seq data and down stream analysis.☆42Updated 4 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆29Updated 4 months ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆46Updated 4 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆33Updated 7 months ago
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆45Updated this week
- ☆69Updated 8 months ago
- ☆63Updated 2 weeks ago
- Analysis pipeline for ATAC-seq data☆35Updated 10 months ago
- release version☆46Updated 2 years ago
- My youtube programming scripts☆33Updated last week
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆40Updated last month
- An R package to visualize bigwigs.☆29Updated 2 years ago
- ☆56Updated 2 years ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆57Updated 4 months ago
- ☆10Updated 7 years ago
- Transcriptomics Visualization R package.☆56Updated 8 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts (from Broad Firehose and TCGA MC3 Project)☆83Updated 7 months ago
- Install GISTIC2 by one line code; GISTIC2 docker image☆40Updated last year
- extract gene TSS/TES site form gencode/ensembl/gencode database GTF file and export bed format file.☆10Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆49Updated last year
- Integrative pathway enrichment analysis of multivariate omics data☆98Updated last month
- A R package for advanced single cell data viz☆54Updated 10 months ago
- Create KEGG.db Package☆58Updated last year
- ☆41Updated 3 years ago
- ☆93Updated 10 months ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆61Updated 3 years ago
- ☆56Updated last year
- collected resource for scRNA-seq analysis☆54Updated last year