hscells / cui2vec
Utility for cui2vec in Go
☆12Updated 2 years ago
Alternatives and similar repositories for cui2vec:
Users that are interested in cui2vec are comparing it to the libraries listed below
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- Natural language generation for discrete data in EHRs☆22Updated 5 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 4 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- Repository for managing python tools that model standoff annotations for i2b2 2014 challenge☆14Updated 9 years ago
- Medical Similarity Dataset creation from SNOMED☆27Updated 2 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆55Updated 6 years ago
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Updated 7 years ago
- A simple REST-server around ctakes clinical pipeline.☆30Updated 8 years ago
- Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.☆25Updated 8 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 5 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- ☆72Updated last year
- ☆97Updated 3 years ago
- Medical Relations and Entities Extraction☆36Updated 2 years ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago
- ☆53Updated 4 years ago
- Bio-YODIE is GATE's biomedical named entity linking pipeline.☆17Updated 5 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 5 years ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Updated 7 years ago
- Abbreviation definition dection library trained on PubMed abstracts☆47Updated 4 years ago
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 4 years ago
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Updated 2 years ago
- MedXN is a medication normalization system built upon Apache UIMA framework.☆23Updated last year
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago