HumanCellAtlas / data-storeLinks
Design specs and prototypes for the HCA Data Storage System (DSS, "blue box")
☆41Updated last month
Alternatives and similar repositories for data-store
Users that are interested in data-store are comparing it to the libraries listed below
Sorting:
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- SevenBridges Python Api bindings☆46Updated 6 months ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- GA4GH Variation Representation Python Implementation☆59Updated this week
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated last week
- python access to UCSC genomes database☆136Updated 5 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated last month
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- A cookiecutter template for Snakemake workflows☆59Updated 3 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated last year
- ☆37Updated 4 months ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated last week
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- ☆62Updated 8 years ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆74Updated 4 years ago
- NGS Language Bindings☆119Updated last year
- WDL and CWL compiler for the DNAnexus platform☆34Updated last month
- Extensible specification for representing and uniquely identifying biological sequence variation☆93Updated last month
- ncbi-vdb☆92Updated this week
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 5 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Utilities for building and managing bioconda recipes☆103Updated 2 weeks ago
- Workflow Description Language developer tools & local runner☆193Updated 2 weeks ago
- MyVariant.info: A BioThings API for human variant annotations☆95Updated last month
- See the main fork of this repository here >>>☆38Updated 3 months ago
- Python-based framework for computational immunomics☆40Updated 4 years ago