Design specs and prototypes for the HCA Data Storage System (DSS, "blue box")
☆41Feb 12, 2026Updated last month
Alternatives and similar repositories for data-store
Users that are interested in data-store are comparing it to the libraries listed below
Sorting:
- Simple walk-throughs of interacting with the DCP as a downstream data consumer.☆17Feb 11, 2026Updated last month
- A repository housing metadata and data files (or links to data files) that are being prepared as sample data bundles for various uses.☆13Feb 12, 2022Updated 4 years ago
- Software for exploration of gene expression data from single-cell RNA sequencing.☆28Jun 20, 2019Updated 6 years ago
- Fast streams for block gzip files.☆14Nov 11, 2025Updated 4 months ago
- Amazon Web Services Operator Interface☆68Feb 1, 2026Updated last month
- succinct labeled graphs with collections and paths☆15Nov 18, 2018Updated 7 years ago
- An app store for scientific workflows, tools, notebooks, and services☆131Mar 9, 2026Updated last week
- Workflow Description Language developer tools & local runner☆200Feb 8, 2026Updated last month
- Tutorials, workflows, and convenience scripts for Single Cell Portal☆51Mar 5, 2024Updated 2 years ago
- Rich IDE support for Workflow Description Language☆43Mar 28, 2025Updated 11 months ago
- experiments with http://regl.party☆11Nov 22, 2016Updated 9 years ago
- APIs for discovering genomics tools, their metadata and their containers☆34Feb 26, 2026Updated 3 weeks ago
- Website user interface for Dockstore in Angular2☆17Mar 11, 2026Updated last week
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 10 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Jan 24, 2018Updated 8 years ago
- Misc. documents for the Bioinformatics Open Source Conference (BOSC), https://www.open-bio.org/events/bosc/☆13Mar 13, 2026Updated last week
- Run-length compressed BWT with LZ77 sampled suffix array☆10Apr 25, 2022Updated 3 years ago
- AWS OIDC Federation☆20Updated this week
- Posts comments on /r/UCSC with info about classes mentioned.☆10Jul 21, 2022Updated 3 years ago
- A tutorial on breast cancer cell classification using deep learning in Tensorflow☆13Sep 21, 2017Updated 8 years ago
- Python client for GA4GH htsget protocol☆15Nov 7, 2022Updated 3 years ago
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated last year
- A set of processes/pipelines for bioinformatics☆14Updated this week
- SOMA PyTorch loaders☆13Sep 24, 2025Updated 5 months ago
- Monarch web application and API☆42Feb 10, 2020Updated 6 years ago
- A fast, parallel, streaming multipart uploader for S3☆14Mar 23, 2017Updated 8 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Jun 7, 2018Updated 7 years ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- Automatic cell detection in microscopy data using convolutional networks☆34Nov 22, 2022Updated 3 years ago
- VariantGrid public repo☆24Updated this week
- A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learn…☆10May 19, 2021Updated 4 years ago
- ☆33Nov 6, 2022Updated 3 years ago
- Utilities for large scale distributed single cell data processing☆24Jan 20, 2026Updated 2 months ago
- Bio3D an HTML5 visualization tool for biological datasets☆25May 31, 2020Updated 5 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Jul 25, 2025Updated 7 months ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- Hosted version of cellxgene☆22Updated this week
- Minimalistic WebUI for passiveDNS tool☆18May 6, 2021Updated 4 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago