HarrisonSteel / ChiBioLinks
ChiBio primary operating system.
☆28Updated last year
Alternatives and similar repositories for ChiBio
Users that are interested in ChiBio are comparing it to the libraries listed below
Sorting:
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆62Updated 6 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆45Updated 5 months ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- Enzyme-constrained genome-scale models in python☆29Updated 2 years ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆46Updated 2 weeks ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- ☆24Updated 3 months ago
- D3.js based visualizations of cobrapy metabolic models☆48Updated 5 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆45Updated this week
- General low-level API☆50Updated 3 years ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 7 months ago
- An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…☆58Updated 2 weeks ago
- Interpretable genotype-phenotype landscape modeling☆36Updated last year
- Vector graphics cartoons from protein structure☆56Updated 3 years ago
- Diverse Genomic Embedding Benchmark☆48Updated 2 months ago
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆22Updated 6 months ago
- A route planner for DNA assembly☆36Updated 6 months ago
- A python wrapper for the benchling api☆50Updated 5 years ago
- ReFramed: metabolic modeling package☆62Updated 2 months ago
- ☆25Updated 2 years ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆60Updated 5 years ago
- Metabolic Engineering Workbench☆40Updated last year
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆58Updated 10 years ago
- Enzyme models that take into account kinetics, allostery and thermodynamics☆27Updated last year
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆32Updated 2 weeks ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 3 years ago
- ☆29Updated last year
- Codon usage tables in code-friendly format + Python bindings☆39Updated 6 months ago