Genomicsplc / ukb-pret
☆24Updated last week
Alternatives and similar repositories for ukb-pret:
Users that are interested in ukb-pret are comparing it to the libraries listed below
- Cross-population polygenic prediction☆76Updated 2 months ago
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆74Updated last month
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆49Updated 11 months ago
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆148Updated 6 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆48Updated 3 months ago
- ☆69Updated last year
- Source code of FUMA GWAS web application☆56Updated last year
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆63Updated 3 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆18Updated 2 years ago
- Meta-analysis of genomewide association scans☆50Updated 6 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆33Updated 2 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆46Updated 3 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆47Updated last month
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆23Updated last year
- A GPU version of SAIGE for full GRM GWAS analysis☆14Updated 2 months ago
- MetaXcan software and manuscript☆153Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆140Updated 8 months ago
- Partners Biobank genomics data QC☆25Updated 4 years ago
- PrediXcan Project☆108Updated 2 years ago
- Genotype-based Prediction (GenoPred)☆69Updated this week
- GREP: Genome for REPositioning drugs☆37Updated 2 years ago
- This is a general (somewhat comprehensive) description of the LNG GWAS pipeline which can be used to guide researchers on how-to run a GW…☆41Updated 2 years ago
- Reading, querying and writing GWAS summary data in VCF format☆74Updated 9 months ago
- Generating polygenic risk scores in UK Biobank (University of Bristol)☆15Updated 4 years ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆12Updated 2 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆35Updated 3 years ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆87Updated last year
- ☆20Updated last year
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆47Updated last year