umich-cphds / createUKBphenome
Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank
☆25Updated last year
Alternatives and similar repositories for createUKBphenome:
Users that are interested in createUKBphenome are comparing it to the libraries listed below
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆33Updated 3 months ago
- GWAS for survival analysis in large cohorts☆21Updated 7 months ago
- Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation ana…☆12Updated 4 years ago
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆12Updated 2 weeks ago
- R package for CAUSE☆54Updated last year
- Bayesian multi-response Mendelian randomisation☆16Updated 2 years ago
- Pair-wise conditional analysis and colocalisation☆39Updated 10 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆47Updated 4 years ago
- lhcMR☆24Updated 11 months ago
- An R package for Mendelian Randomization☆38Updated 11 months ago
- Code for analyses in "Obesity and risk of female reproductive disorders: A Mendelian Randomisation Study"☆16Updated 3 months ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆13Updated 2 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- ☆22Updated 4 years ago
- Non-linear Mendelian randomization☆54Updated last year
- Analysis code for Olink CVD1 - HF analysis☆12Updated 7 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆52Updated 11 months ago
- R package that contains plink binaries for windows, mac and linux☆10Updated 5 years ago
- This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…☆14Updated 3 years ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆50Updated last week
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆33Updated last week
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆18Updated 2 years ago
- Data objects for various sets of instruments☆44Updated 4 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆21Updated 2 weeks ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆87Updated last year
- ☆60Updated 8 months ago
- A package for MR Practical Sessions☆20Updated 4 years ago
- A tool for identifying patients in UK biobank given the definition of disease phenotypes (icd10, icd9, opcs or cancer histology).☆20Updated 6 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 2 years ago