A public reference implementation of HL7 FHIR Genomics Operations (http://build.fhir.org/ig/HL7/genomics-reporting/operations.html)
☆33Nov 14, 2025Updated 3 months ago
Alternatives and similar repositories for genomics-operations
Users that are interested in genomics-operations are comparing it to the libraries listed below
Sorting:
- vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration☆40Sep 9, 2024Updated last year
- A Python package for pharmacogenomics (PGx) research☆84Jan 4, 2026Updated last month
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Nov 8, 2023Updated 2 years ago
- Scripts in R for Landscape Genomics Analyses v.2☆10Feb 17, 2023Updated 3 years ago
- Calculate DNA methylation age using Horvath 2013 method☆11Aug 25, 2017Updated 8 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 2 years ago
- A small C++ library for formatted stream output of standard library objects☆10Dec 16, 2015Updated 10 years ago
- SQLAlchemy models and DDL and ERD generation from chop-dbhi/data-models style JSON endpoints.☆11May 22, 2023Updated 2 years ago
- A GPU-friendly implementation of SpliceAI☆11Dec 8, 2022Updated 3 years ago
- A collection of softwares to handle and model PacBio kinetic signal data and predict epigenetics modifications.☆10Mar 4, 2024Updated last year
- Golang workshop materials☆10Mar 23, 2019Updated 6 years ago
- Newick tree processing☆13Feb 22, 2026Updated last week
- PostgreSQL server wire protocol. Build your own server and start serving connections.☆13Oct 10, 2025Updated 4 months ago
- Sort socks into pairs using deep learning image classification and Kafka stream processing☆14Feb 29, 2020Updated 6 years ago
- Lazily and automatically execute emacs config code☆10Jan 15, 2017Updated 9 years ago
- moddwatch watches files and directories for modifications☆18May 23, 2025Updated 9 months ago
- ☆13Dec 16, 2024Updated last year
- ☆11Mar 16, 2022Updated 3 years ago
- Topsicle utilizes abundance of telomere pattern k-mers to estimate telomere length in long read.☆19Sep 23, 2025Updated 5 months ago
- A crate for working with genomics chain files.☆12Aug 6, 2025Updated 6 months ago
- Declarative patterns to write kubernetes controllers☆10Feb 17, 2021Updated 5 years ago
- Package lmdb-go provides Go bindings and an idiomatic wrapper for the Symas's LMDB database library.☆10Sep 18, 2016Updated 9 years ago
- Vagrant for OpenLDAP testing environment☆12Feb 28, 2014Updated 12 years ago
- SecureDNA client and server components monorepo☆15Oct 20, 2025Updated 4 months ago
- ONC public datasets derived from programs, projects, and research & analysis.☆13Updated this week
- Demographic analysis of Brassica oleracea☆10Jan 30, 2026Updated last month
- OMOP v5.4 on FHIR R4 with SQL Render☆11Jun 30, 2025Updated 8 months ago
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Aug 2, 2021Updated 4 years ago
- Repository of GESIS Shiny Workshop.☆11Jun 6, 2025Updated 8 months ago
- VS Code Clinical Quality Language Extension☆11Updated this week
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated 2 weeks ago
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated 9 months ago
- Immutant adapter for Luminus☆10Sep 12, 2020Updated 5 years ago
- A RESTful API + websockets framework for managing containers over a set of Docker Nodes.☆10Mar 15, 2016Updated 9 years ago
- An Fast variant calling tool to detection germline and somatic variants☆11Feb 21, 2026Updated last week
- Reducing Malloc/Free traffic to cgo☆12Aug 21, 2021Updated 4 years ago
- ☆11Feb 18, 2026Updated last week
- Contains primitives for marshaling/unmarshaling Unix timestamp/epoch to/from built-in time.Time type in JSON☆17Feb 25, 2024Updated 2 years ago
- Semantic comparison of versioned files with git awareness☆12Jul 20, 2023Updated 2 years ago