A public reference implementation of HL7 FHIR Genomics Operations (http://build.fhir.org/ig/HL7/genomics-reporting/operations.html)
☆33Nov 14, 2025Updated 5 months ago
Alternatives and similar repositories for genomics-operations
Users that are interested in genomics-operations are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source for the HL7 Genomics work group's "Clinical Genomics-Reporting" FHIR implementation guide☆26Mar 31, 2026Updated 2 weeks ago
- SQLAlchemy models and DDL and ERD generation from chop-dbhi/data-models style JSON endpoints.☆11May 22, 2023Updated 2 years ago
- A structural variant filtering and prioritization tool for long-read sequencing data☆38Updated this week
- mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes☆22Nov 13, 2025Updated 5 months ago
- Create a clustergram visualization from a user defined network in tsv format.☆13May 1, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Automated Detection and Qualification of Differential Methylation☆16Nov 21, 2023Updated 2 years ago
- CPIC Data definitions and code to use that data☆31Mar 13, 2026Updated last month
- A Python package for pharmacogenomics (PGx) research☆86Mar 22, 2026Updated 3 weeks ago
- ☆18Nov 25, 2025Updated 4 months ago
- Repository of GESIS Shiny Workshop.☆11Jun 6, 2025Updated 10 months ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 3 months ago
- vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration☆40Sep 9, 2024Updated last year
- Source code for the GWAS Diversity Monitor☆16Sep 1, 2025Updated 7 months ago
- An ETL pipeline to transform your EMP data to OMOP.☆16Oct 15, 2025Updated 6 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- An alternative web application for doctors who want to record the condition of the troubled parts of the body. Live Demo:☆17Aug 4, 2017Updated 8 years ago
- Shared test cases across multiple FHIR reference implementations / validators☆54Updated this week
- WHO Antenatal Care Guidelines IG☆23Oct 27, 2025Updated 5 months ago
- Demographic analysis of Brassica oleracea☆10Jan 30, 2026Updated 2 months ago
- OCL Terminology Service v2 in python/django☆19Updated this week
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Nov 8, 2023Updated 2 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆12Mar 16, 2026Updated 3 weeks ago
- Source code for our NAACL 2021 paper "Modeling Diagnostic Label Correlation for Automatic ICD Coding".☆10Oct 23, 2021Updated 4 years ago
- An R package for generating additional bioclimatic variables☆14Dec 5, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ONC public datasets derived from programs, projects, and research & analysis.☆13Updated this week
- A minimap2 implementation with binseq inputs☆17Dec 11, 2025Updated 4 months ago
- A list of all the old-school sites I can find☆16Mar 25, 2025Updated last year
- ☆13Dec 16, 2024Updated last year
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated last month
- Gene copy number prediction from k-mer frequencies☆16Jul 29, 2024Updated last year
- An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data☆15May 17, 2025Updated 10 months ago
- Pangenome-based structural variation caller☆24Jan 20, 2026Updated 2 months ago
- FHIR Power creates Sentences from FHIR Resources or a Bundle of FHIR Resources to power Machine Learning Models, Vector Searches, and Bi…☆13Dec 13, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Geneyx Analysis API☆12Updated this week
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- Nanopore direct RNA basecaller☆11Oct 27, 2022Updated 3 years ago
- LEMMA (Linear Environment Mixed Model Analysis) aims to uncover GxE interactions between SNPs and a linear combination of multiple enviro…☆13Apr 22, 2023Updated 2 years ago
- Large language model of Medical AI, General Medical AI (GMAI)☆17Jan 30, 2024Updated 2 years ago
- OMOP v5.4 on FHIR R4 with SQL Render☆11Jun 30, 2025Updated 9 months ago
- Topsicle utilizes abundance of telomere pattern k-mers to estimate telomere length in long read.☆20Mar 2, 2026Updated last month