Alternatives and similar repositories for BonZeb:

Users that are interested in BonZeb are comparing it to the libraries listed below

• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆53Updated 3 weeks ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• JorritMontijn / UniversalProbeFinder
  A multi-species, multi-ephys format histology processing and probe alignment pipeline
  ☆11Updated last year
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆100Updated 5 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆73Updated 3 weeks ago
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆73Updated 5 months ago
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆21Updated last year
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 7 months ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆26Updated 3 weeks ago
• cortex-lab / Rigbox
  A MATLAB toolbox for running behavioral neuroscience experiments and managing data
  ☆33Updated 11 months ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆58Updated this week
• open-ephys / open-ephys-python-tools
  Python code for interacting with the Open Ephys GUI
  ☆33Updated last week
• Whitlock-Group / HERBS
  ☆51Updated 8 months ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 3 months ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 9 months ago
• petersaj / AP_histology
  Histology processing
  ☆64Updated 3 weeks ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆32Updated last year
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆44Updated 2 years ago
• open-ephys / Bonsai.Miniscope
  Bonsai package for controlling headborne, calcium imaging miniscopes
  ☆12Updated last year
• bonvision / BonVision
  BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of …
  ☆13Updated last year
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆25Updated 2 months ago
• cortex-lab / widefield
  Image processing and tools for widefield imaging
  ☆18Updated 5 years ago
• ThomasAkam / photometry_preprocessing
  Fiber photometry data preprocessing - denoising, photobleaching and motion correction.
  ☆26Updated last year
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆25Updated last year
• mdhumphries / SpikeTrainCommunitiesToolBox
  MATLAB toolbox for spike-train community detection
  ☆15Updated last year
• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆11Updated last month
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆14Updated 2 months ago