churchlandlab / wfield
Tools to process widefield data
☆12Updated 3 years ago
Alternatives and similar repositories for wfield
Users that are interested in wfield are comparing it to the libraries listed below
Sorting:
- Pre-processing pipeline for widefield data☆11Updated 4 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆29Updated 5 years ago
- Pytorch implementation of LocaNMF☆35Updated 5 years ago
- For displaying spherically corrected visual stimulus on a flat screen.☆9Updated 4 months ago
- ☆21Updated last week
- Image processing and tools for widefield imaging☆18Updated 5 years ago
- pyqt5 dependent applications for IBL sessions☆26Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 3 weeks ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆87Updated 6 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆23Updated last month
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Control and design of two-photon photostimulation experiments☆16Updated last year
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆60Updated this week
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Tools to work with Allen Inst CCF data in matlab☆134Updated last year
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated 2 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- ☆36Updated 3 years ago
- Histology processing☆64Updated 3 weeks ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated last month
- Tools to process widefield data☆17Updated 3 weeks ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated 9 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆140Updated last week
- JRCLUST☆34Updated last year
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆18Updated last month
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆73Updated 5 months ago