churchlandlab / wfieldLinks
Tools to process widefield data
☆12Updated 4 years ago
Alternatives and similar repositories for wfield
Users that are interested in wfield are comparing it to the libraries listed below
Sorting:
- Pre-processing pipeline for widefield data☆12Updated 5 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆56Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 2 months ago
- a visualization method for neural data☆241Updated 9 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆151Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆82Updated last year
- Tools to work with Allen Inst CCF data in matlab☆143Updated 6 months ago
- Registration of cells across sessions.☆75Updated last year
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆14Updated last week
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- ☆12Updated 2 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- Histology processing☆72Updated last month
- cortex lab code for electrophysiology☆85Updated last year
- Image processing and tools for widefield imaging☆19Updated 6 years ago
- Deconvolution of calcium imaging data☆104Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆64Updated last month
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153Updated 3 years ago