Alternatives and similar repositories for wfield

Users that are interested in wfield are comparing it to the libraries listed below

• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆32Updated 5 years ago
• churchlandlab / WidefieldImager
  Pre-processing pipeline for widefield data
  ☆12Updated 5 years ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆157Updated 3 weeks ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆55Updated 2 years ago
• MouseLand / rastermap
  a visualization method for neural data
  ☆239Updated 8 months ago
• zhoupc / CNMF_E
  Constrained Nonnegative Matrix Factorization for microEndoscopic data
  ☆148Updated last year
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆131Updated 2 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆143Updated 4 months ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆122Updated last year
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• JinghaoLu / MIN1PIPE
  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
  ☆63Updated last year
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆99Updated last year
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆79Updated 7 months ago
• llerussell / Naparm
  Control and design of two-photon photostimulation experiments
  ☆17Updated last year
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆29Updated 4 months ago
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆82Updated last year
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆48Updated 3 years ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆138Updated 5 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆96Updated last year
• cortex-lab / Suite2P
  Tools for processing 2P recordings
  ☆130Updated 2 years ago
• mikarubi / voluseg
  pipeline for volumetric cell segmentation
  ☆13Updated last week
• billkarsh / CatGT
  SpikeGLX postprocessing [tshift filter CAR fix join extract]
  ☆12Updated last month
• petersaj / AP_histology
  Histology processing
  ☆71Updated 2 months ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆28Updated this week
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆120Updated 3 weeks ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆64Updated 2 weeks ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆99Updated last week
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆85Updated last year
• cwindolf / dartsort
  ☆27Updated 2 weeks ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆31Updated 2 months ago