Alternatives and similar repositories for wfield

Users that are interested in wfield are comparing it to the libraries listed below

• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆30Updated 5 years ago
• churchlandlab / WidefieldImager
  Pre-processing pipeline for widefield data
  ☆11Updated 4 years ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• zhuangjun1981 / WarpedVisualStim
  For displaying spherically corrected visual stimulus on a flat screen.
  ☆9Updated 5 months ago
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆23Updated 2 months ago
• cwindolf / dartsort
  ☆21Updated last week
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆27Updated last week
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆74Updated last month
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆89Updated 6 months ago
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆44Updated 2 years ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆144Updated this week
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 10 months ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆46Updated 3 weeks ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆25Updated last week
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆34Updated 2 months ago
• cortex-lab / widefield
  Image processing and tools for widefield imaging
  ☆18Updated 5 years ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆134Updated last year
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆63Updated last week
• Whitlock-Group / HERBS
  ☆51Updated 9 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆124Updated 4 months ago
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago
• mikarubi / voluseg
  pipeline for volumetric cell segmentation
  ☆12Updated 2 months ago
• petersaj / AP_histology
  Histology processing
  ☆65Updated last month
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆73Updated 5 months ago
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆25Updated 3 months ago
• llerussell / Naparm
  Control and design of two-photon photostimulation experiments
  ☆16Updated last year
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆60Updated 2 weeks ago