churchlandlab / wfieldLinks
Tools to process widefield data
☆12Updated 4 years ago
Alternatives and similar repositories for wfield
Users that are interested in wfield are comparing it to the libraries listed below
Sorting:
- Pre-processing pipeline for widefield data☆12Updated 4 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- a visualization method for neural data☆238Updated 7 months ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Tools to work with Allen Inst CCF data in matlab☆142Updated 4 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 7 months ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆11Updated this week
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated 2 weeks ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆81Updated 11 months ago
- Code for internal lab sharing - polishing has started but is by no means complete☆130Updated last year
- Calcium Data Extraction and Analysis☆47Updated 2 years ago
- Registration of cells across sessions.☆75Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆53Updated 2 years ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆29Updated 3 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆64Updated last month
- cortex lab code for electrophysiology☆85Updated last year
- A curated list of awesome Neuropixels resources.☆118Updated 3 weeks ago
- pyqt5 dependent applications for IBL sessions☆31Updated last month
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆137Updated 4 months ago
- Parameter-free statistical testing package☆11Updated 2 weeks ago
- ☆52Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 6 months ago
- Tools to process widefield data☆19Updated 2 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆98Updated this week