Cello v2 is the continuation of the Cello genetic circuit design software.
☆68May 16, 2022Updated 3 years ago
Alternatives and similar repositories for Cello-v2
Users that are interested in Cello-v2 are comparing it to the libraries listed below
Sorting:
- Streamlined Cello Algorithm. Feed it Verilog and UCF from CIDARLAB/CELLO-UCF, and run celloAlgo.py in terminal to make genetic circuit de…☆20Sep 16, 2024Updated last year
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Apr 9, 2025Updated 11 months ago
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…☆65Dec 23, 2025Updated 2 months ago
- Batch domestication of genetic parts with Python☆16May 12, 2025Updated 10 months ago
- Toolkit for Modelling and Simulation of Gene Expressions and Metabolism☆13Jan 9, 2026Updated 2 months ago
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 3 years ago
- SBOL Designer Project☆31Jun 4, 2021Updated 4 years ago
- Genetic circuit design automation☆861Sep 19, 2022Updated 3 years ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15May 29, 2025Updated 9 months ago
- ☆15Mar 12, 2026Updated last week
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆79Mar 4, 2026Updated 2 weeks ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Sep 30, 2022Updated 3 years ago
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.☆24Apr 5, 2023Updated 2 years ago
- The Synthetic Biology Open Language (SBOL)☆23Apr 25, 2023Updated 2 years ago
- 🎺 Plot DNA digestion band patterns with Python☆20May 12, 2025Updated 10 months ago
- curated list of seminal reviews and papers in synthetic biology☆13Jun 8, 2017Updated 8 years ago
- General low-level API☆50Jul 18, 2022Updated 3 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆66May 12, 2025Updated 10 months ago
- ☆12Jan 23, 2020Updated 6 years ago
- C++ implementation of SBOL 2.3.2☆17Oct 13, 2020Updated 5 years ago
- Draw genetic elements with HTML & CSS☆17Feb 8, 2017Updated 9 years ago
- Visualization of fluorescent protein properties with d3.js☆13Jan 18, 2017Updated 9 years ago
- ChiBio primary operating system.☆28Feb 10, 2026Updated last month
- 🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software☆20Dec 10, 2022Updated 3 years ago
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 8 years ago
- A route planner for DNA assembly☆36May 12, 2025Updated 10 months ago
- 🎨 Python library to plot multi-part genetic constructs☆26Apr 9, 2025Updated 11 months ago
- Software for article "Deep learning to predict the lab-of-origin of engineered DNA"☆13Aug 7, 2018Updated 7 years ago
- A Python molecular biology CAD tool with a dead-simple user interface☆12Dec 8, 2022Updated 3 years ago
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 4 years ago
- An amino acid sequence annotator☆17May 15, 2025Updated 10 months ago
- Java library for parsing and manipulating graph representations of gate-level Verilog netlists☆15Jan 9, 2017Updated 9 years ago
- A simple semantic search engine for scientific papers.☆28Sep 14, 2023Updated 2 years ago
- Find common blocks and differences between DNA sequences☆42Nov 5, 2025Updated 4 months ago
- Equipment for use in laboratiories and otherwise, mostly 3D printable☆11Jan 6, 2016Updated 10 years ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated last month
- Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array☆10Mar 7, 2024Updated 2 years ago
- Gigabase: Synthetic Biology Cell Modeling Project☆19Nov 3, 2013Updated 12 years ago
- TISIGNER: Unleash the power of synthetic biology☆29May 24, 2025Updated 9 months ago