CIDARLAB / Cello-v2
Cello v2 is the continuation of the Cello genetic circuit design software.
☆56Updated 2 years ago
Alternatives and similar repositories for Cello-v2:
Users that are interested in Cello-v2 are comparing it to the libraries listed below
- General low-level API☆49Updated 2 years ago
- SBOL Designer Project☆31Updated 3 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆54Updated last year
- A modular compiler for biological chemical reaction networks☆42Updated 4 months ago
- Release of the whole cell E. coli model.☆62Updated last month
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆36Updated 6 years ago
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importin…☆56Updated last month
- Repository for collective design of an iGEM DNA distribution☆43Updated last year
- Native python implementation of SBOL 3.0 specification☆37Updated 9 months ago
- A high-fidelity E. coli RNA-seq compendium☆32Updated 3 years ago
- A route planner for DNA assembly☆31Updated last year
- Repository of tutorials for The COBRA Toolbox☆18Updated 2 months ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated last year
- ☆12Updated last month
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Updated last year
- Analysis of ensembles of metabolic network reconstructions☆21Updated 2 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆50Updated 6 months ago
- Efficiently keep track of changes to genomes☆38Updated 5 months ago
- Laboratory Open Protocol (LabOP) Language☆40Updated 3 months ago
- 👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.☆18Updated 5 months ago
- D3.js based visualizations of cobrapy metabolic models☆44Updated 4 years ago
- The BiGG Models website server☆80Updated 5 years ago
- Python Environment for Modeling and Simulating Biological Systems☆110Updated 2 months ago
- Python package for creating, calibrating and simulating RBA models☆11Updated last year
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆26Updated 2 years ago
- A Python framework for structural systems biology☆106Updated 4 years ago
- The generic genome-scale metabolic model of Homo sapiens☆102Updated this week
- ☆22Updated 2 years ago
- Computation of Microbial Ecosystems in Time and Space☆21Updated 2 months ago
- Protein structure comparison tools such as SSAP and SNAP☆62Updated last year