Nextstrain build for Zika virus
☆11Aug 3, 2026Updated last week
Alternatives and similar repositories for zika
Users that are interested in zika are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data and scripts for Zika virus tutorial☆10Jul 21, 2026Updated 3 weeks ago
- Nextstrain build for dengue virus☆16Aug 3, 2026Updated last week
- Docker image build for nextstrain/base☆12Aug 5, 2026Updated last week
- Umbrella documentation project for Nextstrain☆18Jul 27, 2026Updated 2 weeks ago
- Trying to make sense of the Age-Diagrams published by the Swiss Federal Office of Health FOPH (Bundesamt für Gesundheit BAG)☆10Jan 5, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- RethinkDB database to support real-time virus analysis☆36Jul 24, 2026Updated 3 weeks ago
- Scripts. config, and snakefiles for seasonal-flu nextstrain builds☆63Updated this week
- Nextstrain build for mpox virus☆50Aug 3, 2026Updated last week
- A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV…☆37Aug 5, 2026Updated last week
- ☆13Jun 7, 2024Updated 2 years ago
- Learn fundamentals of scientific computing for biochemistry using Jupyter notebooks in Python☆17Dec 2, 2025Updated 8 months ago
- interactive phylogenetic tree viewer☆11Jun 26, 2024Updated 2 years ago
- The Nextstrain command-line interface (CLI)—a program called nextstrain—which aims to provide a consistent way to run and visualize patho…☆28Updated this week
- Repository for the SDP Vocabulary Service.☆17Sep 9, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R library for visualizing (social science) sequence data using ggplot2☆16Nov 16, 2025Updated 8 months ago
- VIPER (Variant InsPector and Expert Rating tool) can be utilised to view variant calls and decide whether or not those are true or false …☆16Jan 17, 2022Updated 4 years ago
- 🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission☆29Mar 10, 2026Updated 5 months ago
- Antibiotic resistance predictions in minutes on a laptop☆50Mar 7, 2019Updated 7 years ago
- Coprolite host Identification pipeline☆13Jul 28, 2026Updated 2 weeks ago
- Posterior Analysis of Coalescent Trees☆14Aug 6, 2015Updated 11 years ago
- ViraPipe is distributed Apache Spark based metagenome analytics pipeline for scalable detection of pathogens from NGS data☆16Jul 3, 2018Updated 8 years ago
- The Nextstrain website☆96Updated this week
- Create NNN primers tiling codons of a gene for codon mutagenesis☆14Jan 13, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Perl module to read Excel binary files☆19Nov 23, 2025Updated 8 months ago
- Measuring the Impact of Early-2025 AI on Experienced Open-Source Developer Productivity: https://metr.org/blog/2025-07-10-early-2025-ai-e…☆17Feb 23, 2026Updated 5 months ago
- Official evaluation models and configuration for Stage 1 of the SAIR Mathematics Distillation Challenge: Equational Theories.☆19Apr 19, 2026Updated 3 months ago
- QA/QC pipeline for a MiSeq/HiSeq/Ion Torrent/assembly-only run☆12Dec 2, 2024Updated last year
- Sequential Tree Sampler for online phylogenetics☆16Mar 19, 2019Updated 7 years ago
- ☆16Mar 19, 2026Updated 4 months ago
- Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories☆41Updated this week
- ☆13Mar 11, 2019Updated 7 years ago
- Tools for evolutionary forecasting☆14Jun 19, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15May 9, 2019Updated 7 years ago
- Telegram Bot which calculates interesting data for your birthday☆14Sep 3, 2023Updated 2 years ago
- This is a read-only mirror of the CRAN R package repository. PopGenome — An Efficient Swiss Army Knife for Population Genomic Analyses …☆16Feb 3, 2020Updated 6 years ago
- Example of gatsby site pulling data from Contenta CMS☆14Sep 28, 2017Updated 8 years ago
- Custom migration code for miscellaneous D8 fields and content☆13Nov 27, 2019Updated 6 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Online configuration data for lnav☆11Nov 24, 2016Updated 9 years ago