Alternatives and similar repositories for ERBR-RNA-formerly-ERNIE-RNA

Users that are interested in ERBR-RNA-formerly-ERNIE-RNA are comparing it to the libraries listed below

• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆110Updated 6 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆65Updated last month
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆74Updated 7 months ago
• westlake-repl / ESM-Ezy
  ☆29Updated last month
• yikunpku / RNA-MSM
  Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…
  ☆65Updated last year
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆118Updated 2 weeks ago
• varun-shanker / structural-evolution
  ☆113Updated last year
• ai4protein / ProSST
  🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)
  ☆135Updated 3 months ago
• zhanghaicang / carbonmatrix_public
  ☆116Updated 3 months ago
• duolinwang / S-PLM
  S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
  ☆68Updated 2 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆68Updated 3 years ago
• ai4protein / VenusFSFP
  VenusFSFP: Few-Shot Protein Fitness Prediction
  ☆93Updated 3 weeks ago
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆46Updated last year
• Luo-SynBioLab / UniKP
  ☆81Updated last year
• bio-ontology-research-group / deepgo2
  ☆44Updated last year
• CSUBioGroup / DPFunc
  ☆48Updated last month
• ai4protein / VenusFactory
  🏭 Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers. (ACL Demo 2025)
  ☆148Updated last week
• ScorpioLea / AiCE
  Predicting high-fitness mutations based on protein inverse folding models
  ☆56Updated last month
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆59Updated last week
• westlake-repl / ProTrek
  ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
  ☆129Updated 3 weeks ago
• zchwang / CataPro
  A generalized enzyme kinetics parameter prediction model.
  ☆60Updated 2 months ago
• steineggerlab / foldseek-analysis
  Scripts to benchmark and train foldseek
  ☆39Updated last year
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆91Updated 3 weeks ago
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆75Updated 5 months ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆60Updated 2 years ago
• dahjan / DMS_opt
  ☆72Updated 5 years ago
• kundajelab / ImmuneCLIP
  CLIP-based model for aligning epitopes to immune receptors
  ☆11Updated 4 months ago
• ai4protein / Pro-Prime
  ☆70Updated 3 weeks ago
• CatIIIIIIII / RNAErnie
  Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
  ☆51Updated 11 months ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆72Updated last week